RNA–Protein interactions for RNA: ENST00000544588.1

CIT-214, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-214ENST00000544588 NRDCO43847 1150 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 RASSF9O75901 435 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 POLBP06746 335 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 CCDC175P0C221 793 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 BRAFP15056 766 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 ITGALP20701 1170 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 CD82P27701 267 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 STIP1P31948 543 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 MC4RP32245 332 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 SRSF6Q13247 344 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 NFE2L1Q14494 772 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 KRT33BQ14525 404 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 GSE1Q14687 1217 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 POU6F1Q14863 301 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 DCAF12Q5T6F0 453 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 ANKS6Q68DC2 871 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 DENND5AQ6IQ26 1287 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 VASH2Q86V25 355 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 DNAAF3Q8N9W5 541 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 SLC35B2Q8TB61 432 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 SLC39A7Q92504 469 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 ULK4Q96C45 1275 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 ZNF514Q96K75 400 aaPredicted RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 DNAJC1Q96KC8 554 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 TGM7Q96PF1 710 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 POT1Q9NUX5 634 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 IMP3Q9NV31 184 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 SMOXQ9NWM0 555 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 B3GALT1Q9Y5Z6 326 aa12.92□□□□□ -0.34
CIT-214ENST00000544588 CFAP20Q9Y6A4 193 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 SETXQ7Z333 2677 aaKnown RBP12.92□□□□□ -0.34
CIT-214ENST00000544588 LRRK1Q38SD2 2015 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 STMND1H3BQB6 276 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 K7ENP7 123 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 GAS8O95995 478 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 SEPHS1P49903 392 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 ATP1A2P50993 1020 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 GFERP55789 205 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 XIAPP98170 497 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 RHDQ02161 417 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 FOXM1Q08050 763 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 PLCL1Q15111 1095 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 AGAP9Q5VTM2 703 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 IRGCQ6NXR0 463 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 INO80CQ6PI98 192 aaPredicted RBP12.91□□□□□ -0.34
CIT-214ENST00000544588 WASH2PQ6VEQ5 465 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 PPP1R21Q6ZMI0 780 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 FAM83HQ6ZRV2 1179 aaPredicted RBP12.91□□□□□ -0.34
CIT-214ENST00000544588 ARHGAP22Q7Z5H3 698 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 SLC13A5Q86YT5 568 aaPredicted RBP12.91□□□□□ -0.34
CIT-214ENST00000544588 CFAP206Q8IYR0 622 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 IL22RA1Q8N6P7 574 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 CCDC89Q8N998 374 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 PMEPA1Q969W9 287 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 COL26A1Q96A83 441 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 COPS8Q99627 209 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 ASPSCR1Q9BZE9 553 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 UCK1Q9HA47 277 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 ARNT2Q9HBZ2 717 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 SLC40A1Q9NP59 571 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 WASH6PQ9NQA3 447 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 ACSL6Q9UKU0 697 aa12.91□□□□□ -0.34
CIT-214ENST00000544588 ANKRD36A6QL64 1941 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 DSPP15924 2871 aaKnown RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 MGAT4DA6NG13 374 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 B4E171 279 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 CAPN5O15484 640 aaPredicted RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 EFSO43281 561 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 LDB2O43679 373 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 LIASO43766 372 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 AP2A1O95782 977 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 PRB1P04280 392 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 ETS1P14921 441 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 TSPAN7P41732 249 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 ZNF140P52738 457 aaPredicted RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 RAB15P59190 212 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 MSLNQ13421 630 aaPredicted RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 GPR18Q14330 331 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 RPE65Q16518 533 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 SNX20Q7Z614 316 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 PRUNE1Q86TP1 453 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 LINC00523Q86TU6 105 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 LRRC8AQ8IWT6 810 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 RBM12BQ8IXT5 1001 aaKnown RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 ZSCAN1Q8NBB4 408 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 OR52K1Q8NGK4 314 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 HEXDCQ8WVB3 486 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 RNF31Q96EP0 1072 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 C9orf72Q96LT7 481 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 C12orf66Q96MD2 445 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 FRMD8P1Q9BZ68 369 aaPredicted RBP12.9□□□□□ -0.34
CIT-214ENST00000544588 WWP1Q9H0M0 922 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 ETNK1Q9HBU6 452 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 PDP2Q9P2J9 529 aa12.9□□□□□ -0.34
CIT-214ENST00000544588 PRR19A6NJB7 356 aa12.89□□□□□ -0.35
CIT-214ENST00000544588 POLR1CO15160 346 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms