RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 NEK2P51955 445 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 ZNF135P52742 658 aaPredicted RBP13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 DNAJB13P59910 316 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 YBX1P67809 324 aaKnown RBP13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 TUSC3Q13454 348 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 CYP2A13Q16696 494 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 MS4A13Q5J8X5 152 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 GPR180Q86V85 440 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 SLC15A4Q8N697 577 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 CNIH3Q8TBE1 160 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 TAMM41Q96BW9 452 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 CIPCQ9C0C6 399 aa13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 RPF2Q9H7B2 306 aaKnown RBP13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 SCHIP1Q9P0W5 487 aaPredicted RBP13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.08□□□□□ -0.32
PCMTD1-208ENST00000544451 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 RAD51BO15315 384 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 CBFA2T3O75081 653 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 SEC24AO95486 1093 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 PENKP01210 267 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 HLA-DPA1P20036 260 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 POLR2IP36954 125 aaKnown RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ATP6V0D1P61421 351 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 CCDC85BQ15834 202 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 POM121L1PQ3SYA9 428 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 RNF219Q5W0B1 726 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ANKRD34AQ69YU3 496 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 CYP20A1Q6UW02 462 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 EBPLQ9BY08 206 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ADGRE3Q9BY15 652 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 MFSD1Q9H3U5 465 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 SH3BP4Q9P0V3 963 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ZNF490Q9ULM2 529 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 RAI2Q9Y5P3 530 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 GMPPBQ9Y5P6 360 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 NRXN2Q9P2S2 1712 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TRIM43BA6NCK2 446 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 NDST3O95803 873 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 COL6A1P12109 1028 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TTKP33981 857 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ARSFP54793 590 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 SCAPQ12770 1279 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 GTDC1Q4AE62 458 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ENPP6Q6UWR7 440 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 AHSA2Q719I0 299 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 NECAB2Q7Z6G3 386 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 CARM1Q86X55 608 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 LIX1Q8N485 282 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 OR52J3Q8NH60 311 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 BRSK1Q8TDC3 778 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 NODALQ96S42 347 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ANKRD60Q9BZ19 345 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 MARCH7Q9H992 704 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 HMG20AQ9NP66 347 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 HSFX1Q9UBD0 423 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TBC1D30Q9Y2I9 924 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ZFP37Q9Y6Q3 630 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 C8BP07358 591 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 UROSP10746 265 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 AGXTP21549 392 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 BMXP51813 675 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 MCCD1P59942 119 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 MRPS15P82914 257 aaKnown RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 DAG1Q14118 895 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TRIM60Q495X7 471 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 SPANXN4Q5MJ08 99 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 C6orf136Q5SQH8 315 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TPGS1Q6ZTW0 290 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ITIH5Q86UX2 942 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ADGRG5Q8IZF4 528 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 ZNF419Q96HQ0 510 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 SMAD5Q99717 465 aaKnown RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 LRRC3Q9BY71 257 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 POLR3BQ9NW08 1133 aaPredicted RBP13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 C3orf18Q9UK00 162 aa13.07□□□□□ -0.32
PCMTD1-208ENST00000544451 TCRBV3S1A0A5B6 114 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 MYADML2A6NDP7 307 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 KPNA4O00629 521 aaPredicted RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 ZSCAN9O15535 394 aaPredicted RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 ANGPTL1O95841 491 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 SERPINA1P01009 418 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 ITPKAP23677 461 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 GKP32189 559 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 RFC2P35250 354 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 CLCN2P51788 898 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 VBP1P61758 197 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 FAM189BP81408 668 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 TXNL4AP83876 142 aaKnown RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 TMEM236Q5W0B7 351 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 PM20D1Q6GTS8 502 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 GDF6Q6KF10 455 aaPredicted RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 AFTPHQ6ULP2 937 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 SLC22A15Q8IZD6 547 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 KRTCAP2Q8N6L1 136 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 MCOLN3Q8TDD5 553 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 IMP4Q96G21 291 aaKnown RBP13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 BTN2A3PQ96KV6 586 aa13.06□□□□□ -0.32
PCMTD1-208ENST00000544451 APOLD1Q96LR9 279 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms