RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 FBXL19Q6PCT2 694 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 ITIH5Q86UX2 942 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 KIAA2013Q8IYS2 634 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 CMTM8Q8IZV2 173 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.91■□□□□ 0.14
VARS2-212ENST00000542001 NACC2Q96BF6 587 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 FEM1AQ9BSK4 669 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 C1orf21Q9H246 121 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 MFSD1Q9H3U5 465 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 REEP1Q9H902 201 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 GMPPBQ9Y5P6 360 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 MTMR11A4FU01 709 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 CAPN14A8MX76 684 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 ARVCFO00192 962 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 SH3BP2P78314 561 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 FAM124BQ9H5Z6 455 aaPredicted RBP15.91■□□□□ 0.14
VARS2-212ENST00000542001 BRD9Q9H8M2 597 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 CLCA2Q9UQC9 943 aa15.91■□□□□ 0.14
VARS2-212ENST00000542001 ANKRD66B4E2M5 251 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 GLUD1P00367 558 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 RPLP2P05387 115 aaKnown RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 UROSP10746 265 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 PRDX6P30041 224 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 PRDX3P30048 256 aaKnown RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 ARHGAP15Q53QZ3 475 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 TECRLQ5HYJ1 363 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 ZNF549Q6P9A3 640 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 ADHFE1Q8IWW8 467 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 YAF2Q8IY57 180 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 TMEM174Q8WUU8 243 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 ASB9Q96DX5 294 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 BTBD9Q96Q07 612 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 EMILIN2Q9BXX0 1053 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 ABCB8Q9NUT2 735 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 RGS17Q9UGC6 210 aaPredicted RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 RAPGEFL1Q9UHV5 662 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 MAPK1P28482 360 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 PIGFQ07326 219 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 CBX2Q14781 532 aaPredicted RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 ZNF678Q5SXM1 525 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 PLPP4Q5VZY2 271 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 MAMDC4Q6UXC1 1216 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 DNAJB7Q7Z6W7 309 aaPredicted RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 GIPC3Q8TF64 312 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 AARSD1Q9BTE6 412 aaKnown RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 FANCEQ9HB96 536 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 SMPD3Q9NY59 655 aaPredicted RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 DUSP12Q9UNI6 340 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 TBC1D30Q9Y2I9 924 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 H0Y858 1186 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 CXCL14O95715 111 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 S1PR4O95977 384 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 POLR2EP19388 210 aaKnown RBP15.9■□□□□ 0.14
VARS2-212ENST00000542001 CCR3P51677 355 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 IST1P53990 364 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 CDH4P55283 916 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 OR4D1Q15615 310 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 TAZQ16635 292 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 KLHDC10Q6PID8 442 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 MAVSQ7Z434 540 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 CCDC103Q8IW40 242 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 OR9Q1Q8NGQ5 310 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 SLC47A1Q96FL8 570 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 RAB26Q9ULW5 256 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 TTC3P53804 2025 aa15.9■□□□□ 0.14
VARS2-212ENST00000542001 A0A0G2JN53 185 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 RSL1D1O76021 490 aaKnown RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 CATP04040 527 aaKnown RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 OCM2P0CE71 109 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 OCMP0CE72 109 aaPredicted RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 MRPS15P82914 257 aaKnown RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 MAD2L1Q13257 205 aaPredicted RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 CHRNA6Q15825 494 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 UNC50Q53HI1 259 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 ZC3H12BQ5HYM0 836 aaKnown RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 RTP2Q5QGT7 225 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 XKR5Q6UX68 686 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 TMPRSS11BQ86T26 416 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 CENPNQ96H22 339 aaPredicted RBP15.89■□□□□ 0.14
VARS2-212ENST00000542001 IGFLR1Q9H665 355 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 CERS4Q9HA82 394 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 ZDHHC4Q9NPG8 344 aa15.89■□□□□ 0.14
VARS2-212ENST00000542001 INHAP05111 366 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 CHIT1Q13231 466 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 DEPDC1Q5TB30 811 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 RAET1GQ6H3X3 334 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 GALNT10Q86SR1 603 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 EGFL6Q8IUX8 553 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 TBC1D21Q8IYX1 336 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 OR4F6Q8NGB9 312 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 COL26A1Q96A83 441 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 INTS7Q9NVH2 962 aaKnown RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 OGDHLQ9ULD0 1010 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 SNX6Q9UNH7 406 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
VARS2-212ENST00000542001 DNAJC15Q9Y5T4 150 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 UTRNP46939 3433 aa15.89■□□□□ 0.13
VARS2-212ENST00000542001 A0A1B0GVG6 124 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms