RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ECT2LQ008S8 904 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 PTK6Q13882 451 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 PTGR1Q14914 329 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 SOWAHAQ2M3V2 549 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 C6orf10Q5SRN2 563 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 RARS2Q5T160 578 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 HEPHL1Q6MZM0 1159 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TAOK1Q7L7X3 1001 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TRAPPC11Q7Z392 1133 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CACNA2D4Q7Z3S7 1137 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CCDC190Q86UF4 302 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 AACSQ86V21 672 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 WDR63Q8IWG1 891 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM199Q8N511 208 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CAMKVQ8NCB2 501 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 MCPH1Q8NEM0 835 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 Q8NFD4 153 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CEP76Q8TAP6 659 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 PTPMT1Q8WUK0 201 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CCDC47Q96A33 483 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 SLC41A2Q96JW4 573 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 MARK4Q96L34 752 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 GFM1Q96RP9 751 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 WDR83Q9BRX9 315 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 SLC25A23Q9BV35 468 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 SPATC1LQ9H0A9 340 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 C2orf40Q9H1Z8 148 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 DENND2DQ9H6A0 471 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 MVB12BQ9H7P6 319 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 PIH1D3Q9NQM4 214 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CYSLTR2Q9NS75 346 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 WSB2Q9NYS7 404 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 TAS2R14Q9NYV8 317 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 HACL1Q9UJ83 578 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 DBNLQ9UJU6 430 aaKnown RBP4.21□□□□□ -1.74
SNHG1-217ENST00000541578 RCOR1Q9UKL0 485 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 PAM16Q9Y3D7 125 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 DAPK1P53355 1430 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 ANKRD50Q9ULJ7 1429 aa4.21□□□□□ -1.74
SNHG1-217ENST00000541578 CEP350Q5VT06 3117 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 ADGRL2O95490 1459 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SBNO1A3KN83 1393 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 METP08581 1390 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 A0A0G2JK05 382 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 KANSL1LA0AUZ9 987 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 CPED1A4D0V7 1026 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 RSL1D1O76021 490 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 RECQL5O94762 991 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 ZWINTO95229 277 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 PENKP01210 267 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 WNT1P04628 370 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 PTMAP06454 111 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 TCEA1P23193 301 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 HOXC9P31274 260 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 TLX1P31314 330 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 HSPA4P34932 840 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 AVPR1AP37288 418 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 LPIN1Q14693 890 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 GGNBP1Q5YKI7 109 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 METTL2BQ6P1Q9 378 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 ZNF549Q6P9A3 640 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 HAUS6Q7Z4H7 955 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SDCCAG8Q86SQ7 713 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SFTPA2Q8IWL1 248 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 MB21D2Q8IYB1 491 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 DSELQ8IZU8 1212 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SPC24Q8NBT2 197 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 TMEM174Q8WUU8 243 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 EME1Q96AY2 570 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 METTL2AQ96IZ6 378 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 LYZL4Q96KX0 146 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 ACOX2Q99424 681 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SYT17Q9BSW7 474 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 B3GNT4Q9C0J1 378 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 EPB41L5Q9HCM4 733 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 HINT3Q9NQE9 182 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 DDX43Q9NXZ2 648 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 HAO2Q9NYQ3 351 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 COQ3Q9NZJ6 369 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 OR14J1Q9UGF5 321 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 ISY1Q9ULR0 285 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 TTC7AQ9ULT0 858 aaPredicted RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 KLHL20Q9Y2M5 609 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.2□□□□□ -1.74
SNHG1-217ENST00000541578 CLSPNQ9HAW4 1339 aa4.2□□□□□ -1.74
SNHG1-217ENST00000541578 KIF1AQ12756 1690 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 A0A1B0GVM2 712 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 MAGEB17A8MXT2 336 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 KDM4EB2RXH2 506 aaPredicted RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 H0YAE9 185 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 STMND1H3BQB6 276 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 GH2P01242 217 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 UBA1P22314 1058 aaKnown RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 MYF6P23409 242 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 GPTP24298 496 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 EEF1B2P24534 225 aaKnown RBP4.19□□□□□ -1.74
SNHG1-217ENST00000541578 CCKBRP32239 447 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 TNFSF8P32971 234 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 PCGF2P35227 344 aa4.19□□□□□ -1.74
SNHG1-217ENST00000541578 HNF4AP41235 474 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms