RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SRP72O76094 671 aaKnown RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 PRAMEF1O95521 474 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 VIPP01282 170 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 TYRP1P17643 537 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 CETN2P41208 172 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 ZNF140P52738 457 aaPredicted RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 GDF10P55107 478 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 ITGA9Q13797 1035 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 PRPSAP1Q14558 356 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 ANKS6Q68DC2 871 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 FAM129CQ86XR2 697 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 SYCE1Q8N0S2 351 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 UBL4BQ8N7F7 174 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 BEND7Q8N7W2 519 aaPredicted RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 OR13C4Q8NGS5 318 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 JPH3Q8WXH2 748 aaPredicted RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 SGF29Q96ES7 293 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 TBL1YQ9BQ87 522 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 FERMT1Q9BQL6 677 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 SIDT1Q9NXL6 827 aaKnown RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 DNMT3AQ9Y6K1 912 aaPredicted RBP16.46■□□□□ 0.23
DDB1-215ENST00000539712 TENM4Q6N022 2769 aa16.46■□□□□ 0.23
DDB1-215ENST00000539712 OR2AG2A6NM03 316 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 C2orf81A6NN90 581 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 STMND1H3BQB6 276 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 STK10O94804 968 aaKnown RBP16.45■□□□□ 0.22
DDB1-215ENST00000539712 UBXN7O94888 489 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 ANKRD34CP0C6C1 535 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 GTF2H3Q13889 308 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 GPR18Q14330 331 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 NFE2L1Q14494 772 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 PARP6Q2NL67 630 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 METRNLQ641Q3 311 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 TTC13Q8NBP0 860 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 RTP4Q96DX8 246 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 C9orf72Q96LT7 481 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 TTC25Q96NG3 672 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 CTRCQ99895 268 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 C19orf43Q9BQ61 176 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 ASPSCR1Q9BZE9 553 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 APMAPQ9HDC9 416 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 FBXO8Q9NRD0 319 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 POT1Q9NUX5 634 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 KLHL3Q9UH77 587 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 PCDHGA4Q9Y5G9 962 aa16.45■□□□□ 0.22
DDB1-215ENST00000539712 EIF4E1BA6NMX2 242 aaKnown RBP16.44■□□□□ 0.22
DDB1-215ENST00000539712 CCL22O00626 93 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 VCLP18206 1134 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 LEPRP48357 1165 aaKnown RBP16.44■□□□□ 0.22
DDB1-215ENST00000539712 LY6DQ14210 128 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 RPE65Q16518 533 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 LINC00303Q3SY05 128 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 MANEAQ5SRI9 462 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 FNBP1LQ5T0N5 605 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 DCAF12Q5T6F0 453 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 PLXDC1Q8IUK5 500 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 TRIM48Q8IWZ4 208 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 RNF10Q8N5U6 811 aaKnown RBP16.44■□□□□ 0.22
DDB1-215ENST00000539712 CCDC112Q8NEF3 446 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 GPR150Q8NGU9 434 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 RSC1A1Q92681 617 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 TMEM121Q9BTD3 319 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 ZCCHC2Q9C0B9 1178 aaKnown RBP16.44■□□□□ 0.22
DDB1-215ENST00000539712 ASB8Q9H765 288 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 WDR70Q9NW82 654 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 PILRAQ9UKJ1 303 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 PSMD13Q9UNM6 376 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 PCDHB11Q9Y5F2 797 aa16.44■□□□□ 0.22
DDB1-215ENST00000539712 CAPN5O15484 640 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 KIF1CO43896 1103 aaKnown RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 CRTAMO95727 393 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 TPH1P17752 444 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 PPM1FP49593 454 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 CDKN1CP49918 316 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 RAB15P59190 212 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 BCL7AQ4VC05 210 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 DET1Q7L5Y6 550 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 TIPARPQ7Z3E1 657 aaKnown RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 RBM12BQ8IXT5 1001 aaKnown RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 EXD3Q8N9H8 876 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 ATG4AQ8WYN0 398 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 ZNF514Q96K75 400 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 LINC00615Q96LM1 132 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 TGM7Q96PF1 710 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 ZMYND15Q9H091 742 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 FAM96AQ9H5X1 160 aa16.43■□□□□ 0.22
DDB1-215ENST00000539712 FEZ2Q9UHY8 353 aaPredicted RBP16.43■□□□□ 0.22
DDB1-215ENST00000539712 GOLGA6L9A6NEM1 432 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 MGAT4DA6NG13 374 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 ZNF189O75820 626 aaPredicted RBP16.42■□□□□ 0.22
DDB1-215ENST00000539712 MSH3P20585 1137 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 PSMA3P25788 255 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 AKT1P31749 480 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 CAPZBP47756 277 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 PPP1CAP62136 330 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 CYP4F2P78329 520 aa16.42■□□□□ 0.22
DDB1-215ENST00000539712 TMPRSS15P98073 1019 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms