RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 ENTPD5O75356 428 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 WDR47O94967 919 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 TRIM16O95361 564 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 MATN4O95460 622 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ANP32DO95626 131 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 CYP17A1P05093 508 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 CA3P07451 260 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ANXA5P08758 320 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GSTM1P09488 218 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 HIST1H2AGP0C0S8 130 aaPredicted RBP10.03□□□□□ -0.8
SPARC-209ENST00000539687 HIST1H2ADP20671 130 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 FSHRP23945 695 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GKP32189 559 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 VHLP40337 213 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 HNMTP50135 292 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 NTHL1P78549 312 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 SLC25A3Q00325 362 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GSTM4Q03013 218 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 PTSQ03393 145 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 FOXM1Q08050 763 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ELP6Q0PNE2 266 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 RPS6KA2Q15349 733 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 RAB30Q15771 203 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 EML3Q32P44 896 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 UGT3A2Q3SY77 523 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 CMPK2Q5EBM0 449 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ACSBG2Q5FVE4 666 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 LDLRAP1Q5SW96 308 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ZFP1Q6P2D0 407 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 RIPOR1Q6ZS17 1223 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ZSWIM9Q86XI8 627 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GALNT13Q8IUC8 556 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 DDIASQ8IXT1 998 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 MIER2Q8N344 545 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 CPA6Q8N4T0 437 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GPR26Q8NDV2 337 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 GIMAP7Q8NHV1 300 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 FRS2Q8WU20 508 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 RSRC1Q96IZ7 334 aaKnown RBP10.03□□□□□ -0.8
SPARC-209ENST00000539687 HIST1H2AHQ96KK5 128 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 MRGPRX3Q96LB0 322 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 VPS35Q96QK1 796 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 SMIM14Q96QK8 99 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 HIST1H2AJQ99878 128 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 H2AFJQ9BTM1 129 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 COL25A1Q9BXS0 654 aaPredicted RBP10.03□□□□□ -0.8
SPARC-209ENST00000539687 ZCCHC2Q9C0B9 1178 aaKnown RBP10.03□□□□□ -0.8
SPARC-209ENST00000539687 DEC1Q9P2X7 70 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 C15orf41Q9Y2V0 281 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 NDUFAF1Q9Y375 327 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 FIS1Q9Y3D6 152 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 ANGPTL3Q9Y5C1 460 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 DNAJC15Q9Y5T4 150 aa10.03□□□□□ -0.8
SPARC-209ENST00000539687 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.03□□□□□ -0.8
SPARC-209ENST00000539687 GBF1Q92538 1859 aa10.02□□□□□ -0.8
SPARC-209ENST00000539687 EDDM13A0A1B0GTR0 161 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 MEI4A8MW99 385 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 TMEM233B4DJY2 109 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 IFRD1O00458 451 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 E2F3O00716 465 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 AIM2O14862 343 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 NUAK1O60285 661 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 LEFTY1O75610 366 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 CSPG5O95196 566 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 SIX3O95343 332 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 C1SP09871 688 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 CISD3P0C7P0 127 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 ATP1B2P14415 290 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 CYP2A7P20853 494 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 LHCGRP22888 699 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 AKT1P31749 480 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 EIF2DP41214 584 aaKnown RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 CDH13P55290 713 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 AP1S2P56377 157 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 MAD2L1Q13257 205 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 KCNC3Q14003 757 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 PTK2BQ14289 1009 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 RCN1Q15293 331 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 KIF19Q2TAC6 998 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 KHDC1Q4VXA5 237 aaKnown RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 SBSNQ6UWP8 590 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 ZNF765Q7L2R6 523 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 LRRC70Q7Z2Q7 622 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 CYP2U1Q7Z449 544 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 TSPAN33Q86UF1 283 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 MYLK4Q86YV6 388 aaPredicted RBP10.02□□□□□ -0.81
SPARC-209ENST00000539687 ETFBKMTQ8IXQ9 262 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 FAM9CQ8IZT9 166 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 DSELQ8IZU8 1212 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 DDHD1Q8NEL9 900 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 TMIEQ8NEW7 156 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 VN1R2Q8NFZ6 395 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 OR8D1Q8WZ84 308 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 ATP6V1E2Q96A05 226 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 FAM136AQ96C01 138 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 TUBGCP3Q96CW5 907 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 PPP1R36Q96LQ0 422 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 ZSWIM3Q96MP5 696 aa10.02□□□□□ -0.81
SPARC-209ENST00000539687 ASB16Q96NS5 453 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms