RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 UBA2Q9UBT2 640 aaPredicted RBP14.39□□□□□ -0.11
CDCA3-207ENST00000538862 EGFL7Q9UHF1 273 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 SLC27A5Q9Y2P5 690 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 NCOR1O75376 2440 aa14.39□□□□□ -0.11
CDCA3-207ENST00000538862 A0A1B0GTL3 188 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 A0A1B0GTW7 788 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 MTMR11A4FU01 709 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 TRIM64CA6NLI5 447 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 ARPC2O15144 300 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 ACSL4O60488 711 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 VPS26AO75436 327 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 NPPAP01160 153 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 PKMP14618 531 aaKnown RBP14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CR2P20023 1033 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 MYF6P23409 242 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 SLC11A1P49279 550 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CCT8P50990 548 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 DIO3P55073 304 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 HYAL1Q12794 435 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 NFYCQ13952 458 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
CDCA3-207ENST00000538862 PDCD4Q53EL6 469 aaKnown RBP14.38□□□□□ -0.11
CDCA3-207ENST00000538862 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 IL31Q6EBC2 164 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 ADGRG5Q8IZF4 528 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CFAP52Q8N1V2 620 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CBR4Q8N4T8 237 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 MDGA1Q8NFP4 955 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 OR56A4Q8NGH8 313 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 BIRC8Q96P09 236 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 GPR21Q99679 349 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CCSER2Q9H7U1 834 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 UBE2ZQ9H832 354 aaPredicted RBP14.38□□□□□ -0.11
CDCA3-207ENST00000538862 RSL24D1Q9UHA3 163 aaKnown RBP14.38□□□□□ -0.11
CDCA3-207ENST00000538862 PCTPQ9UKL6 214 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 IKZF3Q9UKT9 509 aa14.38□□□□□ -0.11
CDCA3-207ENST00000538862 CDC7O00311 574 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PLOD2O00469 737 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 DLGAP1O14490 977 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PER2O15055 1255 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 LINC01565O15544 149 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TRMUO75648 421 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 GALTP07902 379 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 LPOP22079 712 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SLC5A2P31639 672 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TTPAP49638 278 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 CDK9P50750 372 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 EEFSECP57772 596 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ATP6AP1Q15904 470 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PTPRNQ16849 979 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TMTC4Q5T4D3 741 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SPRED1Q7Z699 444 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SYVN1Q86TM6 617 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 RBM12BQ8IXT5 1001 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PAPD5Q8NDF8 572 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TNIP2Q8NFZ5 429 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 OR7D4Q8NG98 312 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 HGH1Q9BTY7 390 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TDRD1Q9BXT4 1180 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ALG2Q9H553 416 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 RIC8BQ9NVN3 520 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 CLDND1Q9NY35 253 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ZIM2Q9NZV7 527 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 LEF1Q9UJU2 399 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TIMM22Q9Y584 194 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 NPEPPSL1A6NEC2 478 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 GRXCR2A6NFK2 248 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SAC3D1A6NKF1 404 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 H3BQ06 376 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 BTN3A1O00481 513 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SNX2O60749 519 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SLC22A3O75751 556 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 RASAL1O95294 804 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PRLP01236 227 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 CHRM3P20309 590 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SLC6A4P31645 630 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PPM1AP35813 382 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ZFP36L2P47974 494 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 NRIP1P48552 1158 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 GSK3BP49841 420 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SCNN1BP51168 640 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 CLCN4P51793 760 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 OXCT1P55809 520 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ARPP19P56211 112 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ERVK-8P63133 956 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ECT2LQ008S8 904 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 PLOD1Q02809 727 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 AASDHQ4L235 1098 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 DNAJC14Q6Y2X3 702 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 EPHX4Q8IUS5 362 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ERI1Q8IV48 349 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 FAM47BQ8NA70 645 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 FAM110BQ8TC76 370 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ADAMTS16Q8TE57 1224 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 C2orf15Q8WU43 125 aaKnown RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 NSMCE3Q96MG7 304 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 SEPT5Q99719 369 aaPredicted RBP14.37□□□□□ -0.11
CDCA3-207ENST00000538862 TCF25Q9BQ70 676 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 ADI1Q9BV57 179 aa14.37□□□□□ -0.11
CDCA3-207ENST00000538862 CD320Q9NPF0 282 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms