RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 MBD1Q9UIS9 605 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 MOSPD1Q9UJG1 213 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 SMG5Q9UPR3 1016 aaKnown RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 ANKRD6Q9Y2G4 727 aa13.95□□□□□ -0.18
CD4-208ENST00000538827 ANKRD11Q6UB99 2663 aaPredicted RBP13.95□□□□□ -0.18
CD4-208ENST00000538827 TMEM120BA0PK00 339 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 QSOX1O00391 747 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 POLR3GO15318 223 aaPredicted RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 LATO43561 262 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 DNAJC6O75061 913 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 CDK14O94921 469 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 AP2A2O94973 939 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 TOP3BO95985 862 aaKnown RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 FTH1P02794 183 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 SLC35E2BP0CK96 405 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 MYCLP1P12525 358 aaPredicted RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 CTSCP53634 463 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 SLC18A2Q05940 514 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 TMEM115Q12893 351 aaPredicted RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 BOP1Q14137 746 aaKnown RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 CSHL1Q14406 222 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 SYTL3Q4VX76 610 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 TMEM220Q6QAJ8 160 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 SLC36A4Q6YBV0 504 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 GCNT7Q6ZNI0 430 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 C1orf210Q8IVY1 113 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 FANCMQ8IYD8 2048 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 CPNE9Q8IYJ1 553 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 ZBTB2Q8N680 514 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 BEND7Q8N7W2 519 aaPredicted RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 KCNJ9Q92806 393 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 ALKBH8Q96BT7 664 aaKnown RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 SGF29Q96ES7 293 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 COX14Q96I36 57 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 APOOQ9BUR5 198 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 LGR4Q9BXB1 951 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 POPDC3Q9HBV1 291 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 AASDHPPTQ9NRN7 309 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 NKIRAS1Q9NYS0 192 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 ATXN10Q9UBB4 475 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 GALPQ9UBC7 116 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 ACOT9Q9Y305 439 aa13.94□□□□□ -0.18
CD4-208ENST00000538827 TP53BP1Q12888 1972 aaPredicted RBP13.94□□□□□ -0.18
CD4-208ENST00000538827 THADAQ6YHU6 1953 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 POM121BA6NF01 834 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 A6NNZ2 444 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 PRAMEF26H0Y7S4 382 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 H0Y8X5 98 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 ZNF8P17098 575 aaPredicted RBP13.93□□□□□ -0.18
CD4-208ENST00000538827 PRLHRP49683 370 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 IRX4P78413 519 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 TTLL9Q3SXZ7 439 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 PAQR3Q6TCH7 311 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 ARMCX6Q7L4S7 300 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 WDR5BQ86VZ2 330 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 ARFGAP2Q8N6H7 521 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 BANPQ8N9N5 519 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 CCDC63Q8NA47 563 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 GIMAP7Q8NHV1 300 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 CD200R1Q8TD46 325 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 ELMO1Q92556 727 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 LINGO1Q96FE5 620 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 HSPA12BQ96MM6 686 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 SLC6A18Q96N87 628 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 SLC30A3Q99726 388 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 TEX101Q9BY14 249 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 MIR1-1HGQ9H1L0 117 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 C12orf65Q9H3J6 166 aaKnown RBP13.93□□□□□ -0.18
CD4-208ENST00000538827 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 TRIM39Q9HCM9 518 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 MLXIPLQ9NP71 852 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 SPATS2LQ9NUQ6 558 aaKnown RBP13.93□□□□□ -0.18
CD4-208ENST00000538827 MKS1Q9NXB0 559 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 FAM53CQ9NYF3 392 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 DMTF1Q9Y222 760 aa13.93□□□□□ -0.18
CD4-208ENST00000538827 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.93□□□□□ -0.18
CD4-208ENST00000538827 FASNP49327 2511 aaKnown RBP13.93□□□□□ -0.18
CD4-208ENST00000538827 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 PRPF4O43172 522 aaKnown RBP eCLIP13.92□□□□□ -0.18
CD4-208ENST00000538827 VEGFDO43915 354 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 MAGEC1O60732 1142 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 LTA4HP09960 611 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 CCDC166P0CW27 439 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 ZNF37AP17032 561 aaPredicted RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 NUDT1P36639 197 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 GLRBP48167 497 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 CCT5P48643 541 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 CLCN7P51798 805 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 KPNA2P52292 529 aaKnown RBP13.92□□□□□ -0.18
CD4-208ENST00000538827 THOP1P52888 689 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 KIAA1024LP59773 190 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 TIAL1Q01085 375 aaKnown RBP eCLIP13.92□□□□□ -0.18
CD4-208ENST00000538827 NFATC4Q14934 902 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 ZNF528Q3MIS6 628 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 BCL7AQ4VC05 210 aa13.92□□□□□ -0.18
CD4-208ENST00000538827 N4BP2L1Q5TBK1 243 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms