RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OR13C4Q8NGS5 318 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 GPR150Q8NGU9 434 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 BRSK1Q8TDC3 778 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 CXorf40BQ96DE9 158 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 RTP4Q96DX8 246 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 RNF31Q96EP0 1072 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 CTRCQ99895 268 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 TBL1YQ9BQ87 522 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 DDA1Q9BW61 102 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 SEMA4CQ9C0C4 833 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 ARNT2Q9HBZ2 717 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.7□□□□□ -0.06
RAB40B-202ENST00000538809 GUCA1BQ9UMX6 200 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 PSMD13Q9UNM6 376 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 WDR37Q9Y2I8 494 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 PCDHGA3Q9Y5H0 932 aa14.7□□□□□ -0.06
RAB40B-202ENST00000538809 C2orf81A6NN90 581 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 B4E171 279 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 CCL22O00626 93 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 POP7O75817 140 aaKnown RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 UBXN7O94888 489 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 AMD1P17707 334 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 VCLP18206 1134 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 TSPAN7P41732 249 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 CCZ1BP86790 482 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 CCZ1P86791 482 aaPredicted RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 GPR18Q14330 331 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 NFE2L1Q14494 772 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 AGAP9Q5VTM2 703 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 TMEM220Q6QAJ8 160 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 ABRAXAS1Q6UWZ7 409 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 AMZ2Q86W34 360 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 LRRC8AQ8IWT6 810 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 TAB3Q8N5C8 712 aaPredicted RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 BEND7Q8N7W2 519 aaPredicted RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 FAM71DQ8N9W8 422 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 LSM14AQ8ND56 463 aaKnown RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 ZNF398Q8TD17 642 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 RSC1A1Q92681 617 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 TGM7Q96PF1 710 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 B3GNT4Q9C0J1 378 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 EPB41L1Q9H4G0 881 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 UCK1Q9HA47 277 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 APMAPQ9HDC9 416 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 POT1Q9NUX5 634 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 SMOXQ9NWM0 555 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 FAM8A1Q9UBU6 413 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 PCDHGA4Q9Y5G9 962 aa14.69□□□□□ -0.06
RAB40B-202ENST00000538809 GCN1Q92616 2671 aaKnown RBP14.69□□□□□ -0.06
RAB40B-202ENST00000538809 SNRNP200O75643 2136 aaKnown RBP14.68□□□□□ -0.06
RAB40B-202ENST00000538809 SRP72O76094 671 aaKnown RBP14.68□□□□□ -0.06
RAB40B-202ENST00000538809 METTL18O95568 372 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 MSH3P20585 1137 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 HALP42357 657 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 LEPRP48357 1165 aaKnown RBP14.68□□□□□ -0.06
RAB40B-202ENST00000538809 ZNF140P52738 457 aaPredicted RBP14.68□□□□□ -0.06
RAB40B-202ENST00000538809 RAB15P59190 212 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 XIAPP98170 497 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 C19orf57Q0VDD7 668 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 OASLQ15646 514 aaKnown RBP14.68□□□□□ -0.06
RAB40B-202ENST00000538809 PARP6Q2NL67 630 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 FNBP1LQ5T0N5 605 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 DCAF12Q5T6F0 453 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 MEI1Q5TIA1 1274 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 ARHGEF18Q6ZSZ5 1173 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 PLXDC1Q8IUK5 500 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 ZNF843Q8N446 348 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 SGF29Q96ES7 293 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 PPP1R2P1Q96PQ5 205 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 C19orf43Q9BQ61 176 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 TMEM121Q9BTD3 319 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 FAM96AQ9H5X1 160 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 ASB8Q9H765 288 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 SLC40A1Q9NP59 571 aa14.68□□□□□ -0.06
RAB40B-202ENST00000538809 CFAP46Q8IYW2 2715 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 AGAP14A8MT82 685 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 CAPN5O15484 640 aaPredicted RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 C9P02748 559 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 CAPZBP47756 277 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 SEPHS1P49903 392 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 ATP1A2P50993 1020 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 CYP4F2P78329 520 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 MC2RQ01718 297 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 DMPKQ09013 629 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 SIX1Q15475 284 aaPredicted RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 SEL1L2Q5TEA6 688 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 DUS1LQ6P1R4 473 aaKnown RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 WASH2PQ6VEQ5 465 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 SLC13A5Q86YT5 568 aaPredicted RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 IL22RA1Q8N6P7 574 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 ATG4AQ8WYN0 398 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 NKD1Q969G9 470 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 DNAJC1Q96KC8 554 aaKnown RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 C9orf72Q96LT7 481 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 ASPSCR1Q9BZE9 553 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 WASH6PQ9NQA3 447 aa14.67□□□□□ -0.06
RAB40B-202ENST00000538809 PIH1D1Q9NWS0 290 aaKnown RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 FEZ2Q9UHY8 353 aaPredicted RBP14.67□□□□□ -0.06
RAB40B-202ENST00000538809 CRLS1Q9UJA2 301 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms