RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 SLA2Q9H6Q3 261 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TBX10O75333 385 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GPR1P46091 355 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GTF2A2P52657 109 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PPP3R1P63098 170 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CACNG1Q06432 222 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TRAM1Q15629 374 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CRTC2Q53ET0 693 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 GNASQ5JWF2 1037 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 FAM83AQ86UY5 434 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZFPM1Q8IX07 1006 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PCSK9Q8NBP7 692 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 DCAKDQ8WVC6 231 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 DNAJB3Q8WWF6 145 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 BHLHE41Q9C0J9 482 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 MIOSQ9NXC5 875 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GLS2Q9UI32 602 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 FKBP7Q9Y680 259 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SLITRK5O94991 958 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ECHS1P30084 290 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 LCN1P31025 176 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ALDH16A1Q8IZ83 802 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TOMM5Q8N4H5 51 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 GOLM1Q8NBJ4 401 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 RAET1EQ8TD07 263 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 NCSTNQ92542 709 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 FATE1Q969F0 183 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MYO19Q96H55 970 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 KAZALD1Q96I82 304 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 DNAJC1Q96KC8 554 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZNF317Q96PQ6 595 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 ACO2Q99798 780 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 TCF25Q9BQ70 676 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.85□□□□□ -1.31
SORT1-209ENST00000538502 SGK2Q9HBY8 427 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SLC7A8Q9UHI5 535 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TCAF1Q9Y4C2 921 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 PDPK1O15530 556 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ACADMP11310 421 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MC4RP32245 332 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ATP5C1P36542 298 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 DNASE1L1P49184 302 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 VMACQ2NL98 169 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ATXN7L2Q5T6C5 722 aaPredicted RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 SERPINA13PQ6UXR4 307 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 LINGO2Q7L985 606 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 FAM35AQ86V20 835 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 TIGD4Q8IY51 512 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZNF781Q8N8C0 355 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 ZNF615Q8N8J6 731 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 OR10H5Q8NGA6 315 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 HDAC2Q92769 488 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 C12orf43Q96C57 262 aaKnown RBP6.85□□□□□ -1.31
SORT1-209ENST00000538502 COL21A1Q96P44 957 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 CDH7Q9ULB5 785 aa6.85□□□□□ -1.31
SORT1-209ENST00000538502 SH3PXD2BA1X283 911 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 MAGEB17A8MXT2 336 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CPNE3O75131 537 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 RP2O75695 350 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GADD45GO95257 159 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ASGR1P07306 291 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 IL7P13232 177 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CD247P20963 164 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PROZP22891 400 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 TAS2R43P59537 309 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GABARAPL2P60520 117 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CTBP1Q13363 440 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GTF2H2Q13888 395 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 IL17AQ16552 155 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RALGPS1Q5JS13 557 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 GTF2H2CQ6P1K8 395 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ERMP1Q7Z2K6 904 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 HID1Q8IV36 788 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PARP8Q8N3A8 854 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 MARVELD2Q8N4S9 558 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZBTB2Q8N680 514 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 NIPA2Q8N8Q9 360 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 RERGQ96A58 199 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 TCEAL4Q96EI5 215 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CPXM1Q96SM3 734 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 OXCT2Q9BYC2 517 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 ADAMTS10Q9H324 1103 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ATXN3LQ9H3M9 355 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ZDHHC18Q9NUE0 388 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ACTR3BQ9P1U1 418 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 DIP2BQ9P265 1576 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 DCDC2CA8MYV0 355 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 MCIDASD6RGH6 385 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 H0Y858 1186 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 SLC9A3R1O14745 358 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 DCLK1O15075 740 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PMM2O15305 246 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 HMGN1P05114 100 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 PKMP14618 531 aaKnown RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 GMPSP49915 693 aaPredicted RBP6.84□□□□□ -1.31
SORT1-209ENST00000538502 PRKAG1P54619 331 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CDH8P55286 799 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 ADAM8P78325 824 aa6.84□□□□□ -1.31
SORT1-209ENST00000538502 CYP4F8P98187 520 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms