RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 MACC1Q6ZN28 852 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 FRA10AC1Q70Z53 315 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 GOLGA7Q7Z5G4 137 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 ECHDC3Q96DC8 303 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 RPL10LQ96L21 214 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 UHRF1Q96T88 793 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TNPO3Q9Y5L0 923 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 MTCL1Q9Y4B5 1905 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 A0A1W2PP18 115 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TRIM43BA6NCK2 446 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 EFCAB14O75071 495 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SLC25A14O95258 325 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TIMP1P01033 207 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 HSD17B1P14061 328 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 ITGB6P18564 788 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SLC6A2P23975 617 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SERPINA4P29622 427 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 HLA-FP30511 346 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SLC7A1P30825 629 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SPAM1P38567 509 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 LRRC26Q2I0M4 334 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 C6orf136Q5SQH8 315 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 GPRC6AQ5T6X5 926 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 RNF220Q5VTB9 566 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 IRAK1BP1Q5VVH5 260 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 CYP2R1Q6VVX0 501 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 CMTM8Q8IZV2 173 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 MARVELD2Q8N4S9 558 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TRIM43Q96BQ3 446 aaPredicted RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 LRRC58Q96CX6 371 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 SMG9Q9H0W8 520 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 IL1RL2Q9HB29 575 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 CMTM6Q9NX76 183 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 TSR3Q9UJK0 312 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 PTBP2Q9UKA9 531 aaKnown RBP13.82□□□□□ -0.2
LIMK1-208ENST00000538333 HS3ST2Q9Y278 367 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 PPIL1Q9Y3C6 166 aa13.82□□□□□ -0.2
LIMK1-208ENST00000538333 RAD51BO15315 384 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GLUD1P00367 558 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ACRP10323 421 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ATP6V1B2P21281 511 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CA8P35219 290 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CCR2P41597 374 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 UFM1P61960 85 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 FOXM1Q08050 763 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GTF2H2Q13888 395 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 PDK3Q15120 406 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GPR33Q49SQ1 333 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 PDCD4Q53EL6 469 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 FOXB2Q5VYV0 432 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GRAMD4Q6IC98 578 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GTF2H2CQ6P1K8 395 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CRTC1Q6UUV9 634 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 UGT2A3Q6UWM9 527 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CCDC149Q6ZUS6 474 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 DHFR2Q86XF0 187 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 NXPE1Q8N323 547 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GPR26Q8NDV2 337 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ISG20Q96AZ6 181 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 HTATIP2Q9BUP3 242 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 PFDN4Q9NQP4 134 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 RIC8BQ9NVN3 520 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 GID8Q9NWU2 228 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ELOVL2Q9NXB9 296 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CNOT11Q9UKZ1 510 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 RAB26Q9ULW5 256 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 OARD1Q9Y530 152 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 A8MX80 341 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 TAPBPO15533 448 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 AP1G1O43747 822 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 EEDO75530 441 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CAPN1P07384 714 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ZNF26P17031 533 aaPredicted RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 PFKLP17858 780 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 RGS4P49798 205 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 HTR6P50406 440 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 SNRPD1P62314 119 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 TRAF3Q13114 568 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CAPRIN1Q14444 709 aaKnown RBP13.81□□□□□ -0.2
LIMK1-208ENST00000538333 FUT11Q495W5 492 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 TPRG1Q6ZUI0 275 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 MYO1HQ8N1T3 1032 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 KREMEN2Q8NCW0 462 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 OR4F6Q8NGB9 312 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 ZUFSPQ96AP4 578 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 SCRN2Q96FV2 425 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CORO1BQ9BR76 489 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 C1orf50Q9BV19 199 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CRLS1Q9UJA2 301 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 PCDHA9Q9Y5H5 950 aa13.81□□□□□ -0.2
LIMK1-208ENST00000538333 TXNDC9O14530 226 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 SLC22A3O75751 556 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 TRIM16O95361 564 aa13.8□□□□□ -0.2
LIMK1-208ENST00000538333 HSPA8P11142 646 aaKnown RBP13.8□□□□□ -0.2
LIMK1-208ENST00000538333 CHRM1P11229 460 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms