RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ZNF572Q7Z3I7 529 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CACUL1Q86Y37 369 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SLC13A5Q86YT5 568 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MMAAQ8IVH4 418 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 C1orf210Q8IVY1 113 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 MMGT1Q8N4V1 131 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.33□□□□□ -1.722e-11■■■■■ 59.4
SNHG1-208ENST00000538266 CAMKK1Q8N5S9 505 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 TMEM105Q8N8V8 129 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CCDC89Q8N998 374 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 OR2AP1Q8NGE2 309 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 OR5AN1Q8NGI8 311 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 OR2T3Q8NH03 318 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GANCQ8TET4 914 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 AENQ8WTP8 325 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 C1orf54Q8WWF1 131 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GAB3Q8WWW8 586 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ATG4AQ8WYN0 398 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PRCCQ92733 491 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 FATE1Q969F0 183 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GFM2Q969S9 779 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ISG20Q96AZ6 181 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ERLEC1Q96DZ1 483 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PPP1R16AQ96I34 528 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 HIST1H2AHQ96KK5 128 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CAPZA3Q96KX2 299 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 WDR92Q96MX6 357 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 QKIQ96PU8 341 aaKnown RBP eCLIP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PSKH2Q96QS6 385 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 VAT1Q99536 393 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 HIST1H2AJQ99878 128 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 GABRG3Q99928 467 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 POLR1EQ9GZS1 481 aaKnown RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ZDHHC6Q9H6R6 413 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 PDFQ9HBH1 243 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 NT5MQ9NPB1 228 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 DYRK4Q9NR20 520 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 RBM22Q9NW64 420 aaKnown RBP eCLIP4.33□□□□□ -1.721e-8■■■□□ 18.1
SNHG1-208ENST00000538266 KLHL8Q9P2G9 620 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-208ENST00000538266 AMACRQ9UHK6 382 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF148Q9UQR1 794 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 VWA7Q9Y334 891 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 TECTAO75443 2155 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 CHD5Q8TDI0 1954 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 SHROOM3Q8TF72 1996 aa4.33□□□□□ -1.72
SNHG1-208ENST00000538266 EYSQ5T1H1 3165 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 A0A1W2PQF6 199 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 TCRBV7S2A1N4TA0A589 114 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 BCLAF3A2AJT9 711 aaKnown RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CFAP69A5D8W1 941 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 NPEPPSL1A6NEC2 478 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 E7EVH7 732 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 KPNA3O00505 521 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 EBAG9O00559 213 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF185O15231 689 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 EIF3HO15372 352 aaKnown RBP eCLIP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 LIASO43766 372 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 ZNF217O75362 1048 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 RNASEH2AO75792 299 aaKnown RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 KIAA0754O94854 1291 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 SYF2O95926 243 aaKnown RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 GAS8O95995 478 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 IFNB1P01574 187 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 JCHAINP01591 159 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 DNTTP04053 509 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 LPLP06858 475 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 GABRG2P18507 467 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 C5AR1P21730 350 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 XPAP23025 273 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 NFKBIAP25963 317 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 PTPN3P26045 913 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 STIP1P31948 543 aaKnown RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CHRNA3P32297 505 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CDKN1CP49918 316 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 SESN2P58004 480 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 IFI35P80217 286 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 SATB1Q01826 763 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CSTF1Q05048 431 aaKnown RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 ZBTB16Q05516 673 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 C2orf54Q08AI8 447 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 ZBTB17Q13105 803 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 SNX1Q13596 522 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 PRPSAP1Q14558 356 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CST6Q15828 149 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CCNG2Q16589 344 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 TBR1Q16650 682 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 UGT8Q16880 541 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 MYLK3Q32MK0 819 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 P3H1Q32P28 736 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 POM121L1PQ3SYA9 428 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CARD16Q5EG05 197 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 C9orf64Q5T6V5 341 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 AGBL4Q5VU57 503 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 ALS2CLQ60I27 953 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 CCNI2Q6ZMN8 369 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-208ENST00000538266 DPY19L3Q6ZPD9 716 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 MICALCLQ6ZW33 695 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 B4GALNT4Q76KP1 1039 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 TMPRSS6Q8IU80 811 aa4.32□□□□□ -1.72
SNHG1-208ENST00000538266 STK40Q8N2I9 435 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms