RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 ARL15Q9NXU5 204 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ZNF225Q9UK10 706 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PCTPQ9UKL6 214 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 INSL5Q9Y5Q6 135 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CROCCQ5TZA2 2017 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 FFAR2O15552 330 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PARNO95453 639 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CD160O95971 181 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 EEF1B2P24534 225 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RGS4P49798 205 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 TPD52P55327 224 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 LMAN2Q12907 356 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 GTF2H2Q13888 395 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ABRAXAS2Q15018 415 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 GTF2H2CQ6P1K8 395 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CHST15Q7LFX5 561 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 BEND7Q8N7W2 519 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 LMNTD1Q8N9Z9 388 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 BBS2Q9BXC9 721 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 KLF16Q9BXK1 252 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 LIN28AQ9H9Z2 209 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RIC8BQ9NVN3 520 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 GLYATL1P3A0A0U1RQE8 302 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 OR2AG2A6NM03 316 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 SOCS2O14508 198 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RFPL2O75678 378 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 YAP1P46937 504 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RHDQ02161 417 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 INPP5AQ14642 412 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 PGS1Q32NB8 556 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 AARS2Q5JTZ9 985 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 C6orf136Q5SQH8 315 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 NCEH1Q6PIU2 408 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 Q6ZVU0 165 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CHSY3Q70JA7 882 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 GOLGA7Q7Z5G4 137 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 SLAIN1Q8ND83 568 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 OR2T34Q8NGX1 318 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 OR2T3Q8NH03 318 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CYB5D2Q8WUJ1 264 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 AURKBQ96GD4 344 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 TSSK3Q96PN8 268 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 TSEN34Q9BSV6 310 aaKnown RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 IL26Q9NPH9 171 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 IL17CQ9P0M4 197 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 OPTCQ9UBM4 332 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 LHX3Q9UBR4 397 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 CCL26Q9Y258 94 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 RNF11Q9Y3C5 154 aa8.59□□□□□ -1.03
UBE3B-208ENST00000538070 ARIH1Q9Y4X5 557 aaPredicted RBP8.59□□□□□ -1.03
UBE3B-208ENST00000538070 NRG2O14511 850 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GNGT2O14610 69 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CXCL14O95715 111 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ESRRBO95718 433 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SOD2P04179 222 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GNAO1P09471 354 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 IDO1P14902 403 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 XPAP23025 273 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ADSLP30566 484 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 VEGFBP49765 207 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GSK3BP49841 420 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CACNG1Q06432 222 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CRY1Q16526 586 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SLC5A9Q2M3M2 681 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 RFTN2Q52LD8 501 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 PLPP4Q5VZY2 271 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 TMEM214Q6NUQ4 689 aaKnown RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 KLHDC8BQ8IXV7 354 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 KRTCAP2Q8N6L1 136 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 FOXJ1Q92949 421 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SPATA16Q9BXB7 569 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ALG2Q9H553 416 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ELAC1Q9H777 363 aaKnown RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ZNF236Q9UL36 1845 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CHD7Q9P2D1 2997 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ARPC2O15144 300 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 RAD51BO15315 384 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 TBC1D4O60343 1298 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 UROSP10746 265 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 CR2P20023 1033 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SLC6A2P23975 617 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 PTGER3P43115 390 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 NADK2Q4G0N4 442 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 KANK2Q63ZY3 851 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 GAREM2Q75VX8 874 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 ADGRG6Q86SQ4 1221 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SFRP1Q8N474 314 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 TTC30BQ8N4P2 665 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 DLG3Q92796 817 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 MPP4Q96JB8 637 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 MRPL40Q9NQ50 206 aaKnown RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 SPG21Q9NZD8 308 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 VPS9D1Q9Y2B5 631 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 MAGED1Q9Y5V3 778 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 U3KQV3 271 aa8.58□□□□□ -1.04
UBE3B-208ENST00000538070 NPIPB15A6NHN6 443 aaPredicted RBP8.58□□□□□ -1.04
UBE3B-208ENST00000538070 MLYCDO95822 493 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms