RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 HECTD2Q5U5R9 776 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 KRT222Q8N1A0 295 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 LKAAEAR1Q8TD35 194 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 KCNJ9Q92806 393 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 PANX3Q96QZ0 392 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 SMOC1Q9H4F8 434 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 TM7SF3Q9NS93 570 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 EURLQ9NYK6 297 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 PSMC3IPQ9P2W1 217 aaPredicted RBP23.86■■□□□ 1.41
HMGA2-208ENST00000537429 GULP1Q9UBP9 304 aa23.86■■□□□ 1.41
HMGA2-208ENST00000537429 RASGRF2O14827 1237 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 POP7O75817 140 aaKnown RBP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 TRIM16O95361 564 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 LMNAP02545 664 aaKnown RBP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 NME1P15531 152 aaKnown RBP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CD9P21926 228 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CNTFP26441 200 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 SLCO1A2P46721 670 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 BLKP51451 505 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 TIAL1Q01085 375 aaKnown RBP eCLIP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CHST15Q7LFX5 561 aaPredicted RBP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 PHACTR4Q8IZ21 702 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 OR2M4Q96R27 311 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CCM2Q9BSQ5 444 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CAAP1Q9H8G2 361 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 FSCN3Q9NQT6 498 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 LATS2Q9NRM7 1088 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 TRNAU1APQ9NX07 287 aaKnown RBP23.85■■□□□ 1.41
HMGA2-208ENST00000537429 DNAJC28Q9NX36 388 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 SLC23A2Q9UGH3 650 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 GPSM3Q9Y4H4 160 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 CACNA1EQ15878 2313 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 KNL1Q8NG31 2342 aa23.85■■□□□ 1.41
HMGA2-208ENST00000537429 C17orf113A0A1B0GUU1 675 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 CDH16O75309 829 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 KRT38O76015 456 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 GSTM1P09488 218 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 ITGB6P18564 788 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 CHRM3P20309 590 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 CDKN2DP55273 166 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 GSTM4Q03013 218 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 ZNF844Q08AG5 666 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 GRIK2Q13002 908 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 MROH9Q5TGP6 573 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 LRIG3Q6UXM1 1119 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 HDXQ7Z353 690 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 DCLK2Q8N568 766 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 OXR1Q8N573 874 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 ELMO2Q96JJ3 720 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 OLFM1Q99784 485 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TSSK1BQ9BXA7 367 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 NUSAP1Q9BXS6 441 aaKnown RBP23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TMEM168Q9H0V1 697 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TCEAL2Q9H3H9 227 aaPredicted RBP23.84■■□□□ 1.41
HMGA2-208ENST00000537429 GALPQ9UBC7 116 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 CTNNAL1Q9UBT7 734 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 MGAT4DA6NG13 374 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 SMIM23A6NLE4 172 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 E5RI56 91 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 KHNYNO15037 678 aaKnown RBP23.84■■□□□ 1.41
HMGA2-208ENST00000537429 SCAMP1O15126 338 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 JUNDP17535 347 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 CCR7P32248 378 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TAS2R39P59534 338 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 POU4F1Q01851 419 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 BMPR2Q13873 1038 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 ZNF658BQ4V348 819 aaPredicted RBP23.84■■□□□ 1.41
HMGA2-208ENST00000537429 PRAMEF14Q5SWL7 426 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 LGSNQ5TDP6 509 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TAOK1Q7L7X3 1001 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 AMZ2Q86W34 360 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 OR2L2Q8NH16 312 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TIMM29Q9BSF4 260 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 SPATS2LQ9NUQ6 558 aaKnown RBP23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TAS2R13Q9NYV9 303 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 NCDNQ9UBB6 729 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 ST14Q9Y5Y6 855 aa23.84■■□□□ 1.41
HMGA2-208ENST00000537429 TLDC2A0PJX2 215 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 KLHL33A6NCF5 533 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 KRT37O76014 449 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 SNRPAP09012 282 aaKnown RBP23.83■■□□□ 1.41
HMGA2-208ENST00000537429 FDXRP22570 491 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 CLCN7P51798 805 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 ARHGAP8P85298 464 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 PLA2G4EQ3MJ16 856 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 CNPY4Q8N129 248 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 RIBC1Q8N443 379 aaPredicted RBP23.83■■□□□ 1.41
HMGA2-208ENST00000537429 FAM136AQ96C01 138 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 ELF4Q99607 663 aaPredicted RBP23.83■■□□□ 1.41
HMGA2-208ENST00000537429 SLC13A1Q9BZW2 595 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 ZDHHC5Q9C0B5 715 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 APOBEC3BQ9UH17 382 aaKnown RBP23.83■■□□□ 1.41
HMGA2-208ENST00000537429 TBK1Q9UHD2 729 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 SLC39A10Q9ULF5 831 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 PLEKHM1Q9Y4G2 1056 aa23.83■■□□□ 1.41
HMGA2-208ENST00000537429 PCDH15Q96QU1 1955 aa23.82■■□□□ 1.4
HMGA2-208ENST00000537429 TMEM131Q92545 1883 aa23.82■■□□□ 1.4
HMGA2-208ENST00000537429 GPR179Q6PRD1 2367 aa23.82■■□□□ 1.4
HMGA2-208ENST00000537429 KCNJ13O60928 360 aa23.82■■□□□ 1.4
HMGA2-208ENST00000537429 VPS26AO75436 327 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms