RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 CLCA4Q14CN2 919 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 XKR5Q6UX68 686 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 C4orf22Q6V702 233 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 ARHGAP22Q7Z5H3 698 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 GLIS1Q8NBF1 620 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 OR52K1Q8NGK4 314 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 OR2L2Q8NH16 312 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 KCNE4Q8WWG9 221 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 SGF29Q96ES7 293 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 AHCYL2Q96HN2 611 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 RANBP9Q96S59 729 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 PRORYQ9H606 182 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 HOMER3Q9NSC5 361 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 TMEM9Q9P0T7 183 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 WDR37Q9Y2I8 494 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 JRKLQ9Y4A0 524 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 SLC30A1Q9Y6M5 507 aa16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 SMG1Q96Q15 3661 aaKnown RBP16.88■□□□□ 0.29
SFSWAP-205ENST00000537164 RALBP11234 206 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 ETS1P14921 441 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 RPL22P35268 128 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 ETV5P41161 510 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 PRLHRP49683 370 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 DRG2P55039 364 aaKnown RBP16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 TMPRSS15P98073 1019 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 LAMB3Q13751 1172 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 FNBP1LQ5T0N5 605 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 FAM83HQ6ZRV2 1179 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 PDZD3Q86UT5 571 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 REXO1L1PQ8IX06 675 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 RASGEF1CQ8N431 466 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 TAB3Q8N5C8 712 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 CCDC89Q8N998 374 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 AGBL5Q8NDL9 886 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 RCBTB1Q8NDN9 531 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 COPS8Q99627 209 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 TBC1D10AQ9BXI6 508 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 CASS4Q9NQ75 786 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 RAB6BQ9NRW1 208 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 ZDHHC3Q9NYG2 299 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 OGFRQ9NZT2 677 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 PISDQ9UG56 409 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 CRLS1Q9UJA2 301 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 ACSL5Q9ULC5 683 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 PCDHGA3Q9Y5H0 932 aa16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 MN1Q10571 1320 aaPredicted RBP16.87■□□□□ 0.29
SFSWAP-205ENST00000537164 C17orf113A0A1B0GUU1 675 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 OR52A4PA6NMU1 304 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 CCL22O00626 93 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 CEP104O60308 925 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 C9P02748 559 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 FGF3P11487 239 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 ATP1B2P14415 290 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 ACRV1P26436 265 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 CXCR5P32302 372 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 GRIA1P42261 906 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 HALP42357 657 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 UCNP55089 124 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 ACVR1Q04771 509 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 NFE2L1Q14494 772 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 SEPT7Q16181 437 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 SKIDA1Q1XH10 827 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 ZNF658BQ4V348 819 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 PRUNE1Q86TP1 453 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 TRIM48Q8IWZ4 208 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 BEND7Q8N7W2 519 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 SNRNP27Q8WVK2 155 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 PEX13Q92968 403 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 CRELD1Q96HD1 420 aa16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 EIF2B3Q9NR50 452 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 PIH1D1Q9NWS0 290 aaKnown RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 TTC7AQ9ULT0 858 aaPredicted RBP16.86■□□□□ 0.29
SFSWAP-205ENST00000537164 HEATR9A2RTY3 570 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 B4E171 279 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 C9orf172C9J069 976 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CFAP99D6REC4 459 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 E7EVH7 732 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 UBXN7O94888 489 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 APRTP07741 180 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 ANKRD34CP0C6C1 535 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CCL4P13236 92 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CD82P27701 267 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CSTF2P33240 577 aaKnown RBP eCLIP16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 TSPAN7P41732 249 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CDKN1CP49918 316 aaPredicted RBP16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CACNG1Q06432 222 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 CLN3Q13286 438 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 SEPT6Q14141 434 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 GPR18Q14330 331 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 RPE65Q16518 533 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 DET1Q7L5Y6 550 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 SERPINA9Q86WD7 417 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 PLXDC1Q8IUK5 500 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 PIANPQ8IYJ0 282 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 BMPERQ8N8U9 685 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 PRELID2Q8N945 189 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 DNAAF3Q8N9W5 541 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 OR13J1Q8NGT2 312 aa16.85■□□□□ 0.29
SFSWAP-205ENST00000537164 NCSTNQ92542 709 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms