RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 KRTAP1-1Q07627 177 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 GRM3Q14832 879 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 AGAP9Q5VTM2 703 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 SHEQ5VZ18 495 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 FGD2Q7Z6J4 655 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 CPSF7Q8N684 471 aaKnown RBP9.21□□□□□ -0.94
CPSF7-217ENST00000537162 AVL9Q8NBF6 648 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 GOT1L1Q8NHS2 421 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-217ENST00000537162 CASKIN2Q8WXE0 1202 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 NT5C3BQ969T7 300 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 PTERQ96BW5 349 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 ZSCAN31Q96LW9 406 aaPredicted RBP9.21□□□□□ -0.94
CPSF7-217ENST00000537162 Q96MF0 132 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 GPR137Q96N19 417 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 SMIM14Q96QK8 99 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 PLA2G12AQ9BZM1 189 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 ATP13A3Q9H7F0 1226 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 NEUROD4Q9HD90 331 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 KLC4Q9NSK0 619 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 GPATCH2LQ9NWQ4 482 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 CNOT6Q9ULM6 557 aaKnown RBP9.21□□□□□ -0.94
CPSF7-217ENST00000537162 RNF6Q9Y252 685 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 HRH3Q9Y5N1 445 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 SEC16AO15027 2179 aa9.21□□□□□ -0.94
CPSF7-217ENST00000537162 C17orf113A0A1B0GUU1 675 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 PVALEFA0A1B0GWK0 134 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 UBA6A0AVT1 1052 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 J3KR12 359 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF749O43361 778 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 CALUO43852 315 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF30P17039 623 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 RHOQP17081 205 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 CYP2A7P20853 494 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 TBXAS1P24557 533 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 SYCP1Q15431 976 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 Q5PR19 223 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 DNTTIP2Q5QJE6 756 aaKnown RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 ZNF648Q5T619 568 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 IRAK1BP1Q5VVH5 260 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 TRNP1Q6NT89 227 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 FAM131BQ86XD5 332 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 CCDC71Q8IV32 467 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 FAM20CQ8IXL6 584 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 PAF1Q8N7H5 531 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 AMER2Q8N7J2 671 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 TSEN2Q8NCE0 465 aaKnown RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 GPR150Q8NGU9 434 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 THAP3Q8WTV1 239 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 HDAC10Q969S8 669 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 AP2M1Q96CW1 435 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 PGAP3Q96FM1 320 aaPredicted RBP9.2□□□□□ -0.94
CPSF7-217ENST00000537162 RETREG1Q9H6L5 497 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 PDFQ9HBH1 243 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 KCNJ16Q9NPI9 418 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 DMRT3Q9NQL9 472 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 SOHLH2Q9NX45 425 aa9.2□□□□□ -0.94
CPSF7-217ENST00000537162 ZBTB11O95625 1053 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 AGXTP21549 392 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 RPL10P27635 214 aaKnown RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 EPHB1P54762 984 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 DRG2P55039 364 aaKnown RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 BCL2L1Q07817 233 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 OLIG2Q13516 323 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 MRPL14Q6P1L8 145 aaKnown RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 KIRREL2Q6UWL6 708 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 C11orf57Q6ZUT1 292 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 RRAGAQ7L523 313 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 SLC26A9Q7LBE3 791 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 CXorf67Q86X51 503 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 PHYKPLQ8IUZ5 450 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 ARHGEF19Q8IW93 802 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 RPRMLQ8N4K4 120 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 AOPEPQ8N6M6 819 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 PSMF1Q92530 271 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 HAS2Q92819 552 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 TMEM125Q96AQ2 219 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 DPH2Q9BQC3 489 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.19□□□□□ -0.948e-9■■□□□ 12.1
CPSF7-217ENST00000537162 CUEDC2Q9H467 287 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 ARFGAP3Q9NP61 516 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 POT1Q9NUX5 634 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 VPS18Q9P253 973 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 PTGFRNQ9P2B2 879 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 UBA2Q9UBT2 640 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 TRIM10Q9UDY6 481 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 OR12D3Q9UGF7 316 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 GPN3Q9UHW5 284 aaPredicted RBP9.19□□□□□ -0.94
CPSF7-217ENST00000537162 EDARQ9UNE0 448 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 HS3ST3B1Q9Y662 390 aa9.19□□□□□ -0.94
CPSF7-217ENST00000537162 FAM170AA1A519 330 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 DYTNA2CJ06 578 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 SLC9B1P1A6NJY1 282 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 NPIPA5E9PKD4 350 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 LRIG2O94898 1065 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 LETM1O95202 739 aaPredicted RBP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 ZRANB2O95218 330 aaKnown RBP eCLIP9.18□□□□□ -0.94
CPSF7-217ENST00000537162 PVRP15151 417 aa9.18□□□□□ -0.94
CPSF7-217ENST00000537162 ABOP16442 354 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms