RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 SLC7A4O43246 635 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RBP1P09455 135 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SRFP11831 508 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 UQCRBP14927 111 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 GSTT1P30711 240 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ERFP50548 548 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NUDT2P50583 147 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PGGT1BP53609 377 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZP2Q05996 745 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RAD51Q06609 339 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TDGQ13569 410 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TMEM196Q5HYL7 178 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TCHHL1Q5QJ38 904 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 OGFRL1Q5TC84 451 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 AGAP9Q5VTM2 703 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 KIAA1211LQ6NV74 962 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZFP1Q6P2D0 407 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CNSTQ6PJW8 725 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TRIM67Q6ZTA4 783 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MMAAQ8IVH4 418 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PELI3Q8N2H9 469 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CEP70Q8NHQ1 597 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CCDC124Q96CT7 223 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 UBXN10Q96LJ8 280 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TBATAQ96M53 351 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 FAM129BQ96TA1 746 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CENPKQ9BS16 269 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 EFCAB1Q9HAE3 211 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TRPV5Q9NQA5 729 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PRSS16Q9NQE7 514 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MARCH4Q9P2E8 410 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CLDN7O95471 211 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CAPNS1P04632 268 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LTA4HP09960 611 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZCCHC18P0CG32 403 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CD1EP15812 388 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PSMD8P48556 350 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LAMB3Q13751 1172 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ELAVL3Q14576 367 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ACAP2Q15057 778 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TAF1AQ15573 450 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SFT2D3Q587I9 215 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LRRC66Q68CR7 880 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 BNC2Q6ZN30 1099 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ARHGAP22Q7Z5H3 698 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 LDB1Q86U70 411 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SPNS2Q8IVW8 549 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PLPP6Q8IY26 295 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 IL17RCQ8NAC3 791 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PIP4K2CQ8TBX8 421 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 OR8D1Q8WZ84 308 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 HDAC10Q969S8 669 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ARRDC3Q96B67 414 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZNF641Q96N77 438 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SLC6A17Q9H1V8 727 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MFSD1Q9H3U5 465 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 UTP6Q9NYH9 597 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 B4GALT6Q9UBX8 382 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 FKBPLQ9UIM3 349 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CA14Q9ULX7 337 aa12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 NDRG2Q9UN36 371 aaKnown RBP12.8□□□□□ -0.36
CDK5RAP3-202ENST00000536708 BDP1A6H8Y1 2624 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PIKFYVEQ9Y2I7 2098 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CCDC162PA2VCL2 907 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SPINT1O43278 529 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ADAM23O75077 832 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 IPO13O94829 963 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 JUNP05412 331 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 HNRNPLP14866 589 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 INHBCP55103 352 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ENPP2Q13822 863 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SEMA3AQ14563 771 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CDKN3Q16667 212 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ZNF805Q5CZA5 627 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RBM20Q5T481 1227 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RFLNAQ6ZTI6 216 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PTAR1Q7Z6K3 402 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SLC22A9Q8IVM8 553 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PQLC1Q8N2U9 271 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 OR6P1Q8NGX9 317 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PEX13Q92968 403 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 RCN3Q96D15 328 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CATSPER2Q96P56 530 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CDRT15Q96T59 188 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 OLFM1Q99784 485 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 SPATA16Q9BXB7 569 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 GPR63Q9BZJ6 419 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 MEAF6Q9HAF1 191 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 EML4Q9HC35 981 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 COPG1Q9Y678 874 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-202ENST00000536708 TSPAN11A1L157 253 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 C16orf96A6NNT2 1141 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PDLIM1O00151 329 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 KLF8O95600 359 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 CRTAMO95727 393 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 GOT2P00505 430 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 COL9A1P20849 921 aa12.78□□□□□ -0.36
CDK5RAP3-202ENST00000536708 PRAMEP78395 509 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms