RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 NUMBP49757 651 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 GZMKP49863 264 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ECT2LQ008S8 904 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TRA2AQ13595 282 aaKnown RBP eCLIP3.94□□□□□ -1.78
YBX3-205ENST00000536107 DNASE1L3Q13609 305 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ZNF235Q14590 738 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 DCAF10Q5QP82 559 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TPRG1LQ5T0D9 272 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 CERCAMQ5T4B2 595 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 NKAIN2Q5VXU1 208 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 RUSC1-AS1Q66K80 236 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 FAAH2Q6GMR7 532 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 PODNL1Q6PEZ8 512 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 BHLHB9Q6PI77 547 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 C16orf47Q6ZP98 133 aaPredicted RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 TAF8Q7Z7C8 310 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 MFN1Q8IWA4 741 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 CARNMT1Q8N4J0 409 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 LRRC52Q8N7C0 313 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.94□□□□□ -1.78
YBX3-205ENST00000536107 ZNF557Q8N988 423 aaPredicted RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 TMEM161BQ8NDZ6 487 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 FAM46DQ8NEK8 389 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 WFDC11Q8NEX6 87 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 OR10H5Q8NGA6 315 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 GRHL3Q8TE85 626 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 NOC3LQ8WTT2 800 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 KBTBD7Q8WVZ9 684 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TTC17Q96AE7 1141 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 HPDLQ96IR7 371 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TRAPPC9Q96Q05 1148 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ZNF559Q9BR84 538 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 MRPL45Q9BRJ2 306 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 NUDT9Q9BW91 350 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 EDEM3Q9BZQ6 932 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 DPEP2Q9H4A9 486 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 DPEP3Q9H4B8 488 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 C17orf75Q9HAS0 396 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 NMUR1Q9HB89 426 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 NCOA5Q9HCD5 579 aaKnown RBP3.94□□□□□ -1.78
YBX3-205ENST00000536107 FGF21Q9NSA1 209 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TMEM30AQ9NV96 361 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.94□□□□□ -1.78
YBX3-205ENST00000536107 OSER1Q9NX31 292 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 ZNF580Q9UK33 172 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 SARDHQ9UL12 918 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 TRIP11Q15643 1979 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 OBSL1O75147 1896 aa3.94□□□□□ -1.78
YBX3-205ENST00000536107 DENND4CQ5VZ89 1909 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 MXRA5Q9NR99 2828 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 DIDO1Q9BTC0 2240 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 TRBV23-1A0A0A0MS06 115 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 A0A0G2JK05 382 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TYW5A2RUC4 315 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 B4GAT1O43505 415 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 FAM189A1O60320 539 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TACC1O75410 805 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 JRKO75564 520 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 REC8O95072 547 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 KIF20AO95235 890 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 CLDN14O95500 239 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 ALPPP05187 535 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PLEKP08567 350 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 TMEM191BP0C7N4 346 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 WARSP23381 471 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 MGAT1P26572 445 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 RPA1P27694 616 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 CDC25AP30304 524 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 LIMK2P53671 638 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 CASP6P55212 293 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 MAP3K7CLP57077 242 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 KCNK10P57789 538 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TAS2R38P59533 333 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 RPS21P63220 83 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 B4GALNT1Q00973 533 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 MC2RQ01718 297 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 CDH18Q13634 790 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 LLGL1Q15334 1064 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 SRSF7Q16629 238 aaKnown RBP eCLIP3.93□□□□□ -1.78
YBX3-205ENST00000536107 CLPPQ16740 277 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 ANO6Q4KMQ2 910 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 BMP2KLQ5H9B9 411 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 FAM102AQ5T9C2 384 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 C20orf194Q5TEA3 1177 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PRAMEF9Q5VWM5 478 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 CES4AQ5XG92 561 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 HAUS3Q68CZ6 603 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 DUS1LQ6P1R4 473 aaKnown RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 TMEM207Q6UWW9 146 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 DAW1Q8N136 415 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 ZADH2Q8N4Q0 377 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PPM1NQ8N819 430 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 KDM1BQ8NB78 822 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 B3GALNT2Q8NCR0 500 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 GPR156Q8NFN8 814 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 OR4D9Q8NGE8 314 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 PPP1R14CQ8TAE6 165 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TM9SF4Q92544 642 aa3.93□□□□□ -1.78
YBX3-205ENST00000536107 TSACCQ96A04 125 aaPredicted RBP3.93□□□□□ -1.78
YBX3-205ENST00000536107 FUBP1Q96AE4 644 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms