RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 FOXP3Q9BZS1 431 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 DPEP2Q9H4A9 486 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 SIRPGQ9P1W8 387 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 GULP1Q9UBP9 304 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 FTSJ1Q9UET6 329 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 TBC1D29Q9UFV1 150 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 DNAJC16Q9Y2G8 782 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 DNMT3AQ9Y6K1 912 aaPredicted RBP11.87□□□□□ -0.51
CHD4-203ENST00000535717 U3KQA8 63 aa11.87□□□□□ -0.51
CHD4-203ENST00000535717 ZFC3H1O60293 1989 aaKnown RBP11.87□□□□□ -0.51
CHD4-203ENST00000535717 B4DGG1 531 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 TNFSF14O43557 240 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 NOBOXO60393 691 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 NDUFS3O75489 264 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 AP2A2O94973 939 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 KCNK5O95279 499 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 ERVK-10P10266 1014 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 CEACAM1P13688 526 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 OGNP20774 298 aaKnown RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 PBLDP30039 288 aaPredicted RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 CARSP49589 748 aaKnown RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 DMPKQ09013 629 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 DNAJC3Q13217 504 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 PUM1Q14671 1186 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHD4-203ENST00000535717 HSP90AA5PQ58FG0 334 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 ZNF789Q5FWF6 425 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 ZNF470Q6ECI4 717 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 TRMT10BQ6PF06 316 aaKnown RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 XKR5Q6UX68 686 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 FAM83HQ6ZRV2 1179 aaPredicted RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 KCNMB4Q86W47 210 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 DENND6AQ8IWF6 608 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 KYQ8NBH2 561 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 GPR156Q8NFN8 814 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 OR2L2Q8NH16 312 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 ZDHHC1Q8WTX9 485 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 PYROXD1Q8WU10 500 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 LPGAT1Q92604 370 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 LINC00615Q96LM1 132 aaPredicted RBP11.86□□□□□ -0.51
CHD4-203ENST00000535717 FAM129AQ9BZQ8 928 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 P2RY12Q9H244 342 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 OSGEPL1Q9H4B0 414 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 PRDM8Q9NQV8 689 aa11.86□□□□□ -0.51
CHD4-203ENST00000535717 SPAARA0A1B0GVQ0 90 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 A6NCN8 305 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 MGAT4DA6NG13 374 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 PRMT5O14744 637 aaPredicted RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 SNX2O60749 519 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 KCNJ13O60928 360 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 S1PR4O95977 384 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 F7P08709 466 aaPredicted RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 CKMT1AP12532 417 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 CKMT2P17540 419 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 VCLP18206 1134 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 ECHS1P30084 290 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 SLC1A2P43004 574 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 MAGEA4P43358 317 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 ID4P47928 161 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 CTBP1Q13363 440 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 FRG1Q14331 258 aaKnown RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 NFE2L1Q14494 772 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 HLTFQ14527 1009 aaKnown RBP eCLIP11.85□□□□□ -0.51
CHD4-203ENST00000535717 ZNF658BQ4V348 819 aaPredicted RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 TEX35Q5T0J7 233 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 RNF187Q5TA31 235 aaPredicted RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 GLRX5Q86SX6 157 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 C17orf82Q86X59 251 aaPredicted RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 LMNTD2Q8IXW0 634 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 IFT20Q8IY31 132 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 NAGSQ8N159 534 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 ARL10Q8N8L6 244 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 PATE1Q8WXA2 126 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 GLMNQ92990 594 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 CERS2Q96G23 380 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 CCM2Q9BSQ5 444 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 IARS2Q9NSE4 1012 aaKnown RBP11.85□□□□□ -0.51
CHD4-203ENST00000535717 NCKIPSDQ9NZQ3 722 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 FAM8A1Q9UBU6 413 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 FBXO5Q9UKT4 447 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 PIKFYVEQ9Y2I7 2098 aa11.85□□□□□ -0.51
CHD4-203ENST00000535717 SPEGQ15772 3267 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 SPTBN2O15020 2390 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 TRBV23OR9-2A0A075B6M9 112 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 UBA6A0AVT1 1052 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 KLHL33A6NCF5 533 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 QSOX1O00391 747 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 BRAFP15056 766 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 IDSP22304 550 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 RPS3P23396 243 aaKnown RBP eCLIP11.84□□□□□ -0.516e-6■■□□□ 13.1
CHD4-203ENST00000535717 RPL10P27635 214 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 SSTR1P30872 391 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 RPIAP49247 311 aa11.84□□□□□ -0.51
CHD4-203ENST00000535717 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 MAZP56270 477 aaKnown RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 SIM1P81133 766 aaPredicted RBP11.84□□□□□ -0.51
CHD4-203ENST00000535717 DAB2P98082 770 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms