RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 SLC45A3Q96JT2 553 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 CAPZA3Q96KX2 299 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 TEFMQ96QE5 360 aaKnown RBP8.6□□□□□ -1.03
COPB1-210ENST00000533533 LYSMD1Q96S90 227 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
COPB1-210ENST00000533533 OSBPL9Q96SU4 736 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 NAP1L3Q99457 506 aaPredicted RBP8.6□□□□□ -1.03
COPB1-210ENST00000533533 AGAP2Q99490 1192 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 TBL1YQ9BQ87 522 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 SPATA16Q9BXB7 569 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 AP1M1Q9BXS5 423 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 FAM83DQ9H4H8 585 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 MAGEE1Q9HCI5 957 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 SMARCAL1Q9NZC9 954 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 PDP2Q9P2J9 529 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 ANAPC2Q9UJX6 822 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 PILRAQ9UKJ1 303 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 PLEKHM1Q9Y4G2 1056 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 SPO11Q9Y5K1 396 aa8.6□□□□□ -1.03
COPB1-210ENST00000533533 GOLGA6L10A0A0M3HER8 536 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 CTAGE9A4FU28 777 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 EFCAB7A8K855 629 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PGRMC1O00264 195 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 AURKAO14965 403 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZNF185O15231 689 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PSMD3O43242 534 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 EPOP01588 193 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZSCAN5DPP0CG00 497 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 MAP4P27816 1152 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 FASLGP48023 281 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 VPS41P49754 854 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 DPTQ07507 201 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SEPT6Q14141 434 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SIX1Q15475 284 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 TRIP13Q15645 432 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 OASLQ15646 514 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 IGFBP7Q16270 282 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 KCTD19Q17RG1 926 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 ANKS6Q68DC2 871 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PPP1R21Q6ZMI0 780 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 MARK2Q7KZI7 788 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 ARHGAP22Q7Z5H3 698 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 TRIM74Q86UV6 250 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZNF761Q86XN6 746 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 NLGN4XQ8N0W4 816 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 BMPERQ8N8U9 685 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 DNAAF3Q8N9W5 541 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 NLGN4YQ8NFZ3 816 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 OR10G6Q8NH81 332 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 C9orf43Q8TAL5 461 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 GDAP1Q8TB36 358 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 COG1Q8WTW3 980 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 MAGOHBQ96A72 148 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 KIAA1143Q96AT1 154 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 RTP4Q96DX8 246 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 OR2M4Q96R27 311 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 NAPGQ99747 312 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 GORASP1Q9BQQ3 440 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SPRY4Q9C004 299 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 LRRC40Q9H9A6 602 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 GPN2Q9H9Y4 310 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZNF71Q9NQZ8 489 aaPredicted RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 RAB6BQ9NRW1 208 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 RAD18Q9NS91 495 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 HOMER3Q9NSC5 361 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PIH1D1Q9NWS0 290 aaKnown RBP8.59□□□□□ -1.03
COPB1-210ENST00000533533 HACD3Q9P035 362 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PAK5Q9P286 719 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SNX12Q9UMY4 172 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 TMEM98Q9Y2Y6 226 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 PKP3Q9Y446 797 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SPTBP11277 2137 aa8.59□□□□□ -1.03
COPB1-210ENST00000533533 SPENQ96T58 3664 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 CLEC18AA5D8T8 446 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 RGSL1A5PLK6 1076 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 C2orf81A6NN90 581 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 STX7O15400 261 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 DUX1O43812 170 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 GAS8O95995 478 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 SOD1P00441 154 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 PYGLP06737 847 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 PRKAR1AP10644 381 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 GP1BBP13224 206 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 BPIP17213 487 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 TPH1P17752 444 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 TCP1P17987 556 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 FDFT1P37268 417 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 BASP1P80723 227 aaKnown RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 TMPRSS15P98073 1019 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 MC2RQ01718 297 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 LRP8Q14114 963 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 PYCR3Q53H96 274 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 SNAP47Q5SQN1 464 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 WDR74Q6RFH5 385 aaPredicted RBP8.58□□□□□ -1.04
COPB1-210ENST00000533533 CLEC18BQ6UXF7 455 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 CEACAM20Q6UY09 585 aa8.58□□□□□ -1.04
COPB1-210ENST00000533533 ADAMTSL4Q6UY14 1074 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms