RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 METRNLQ641Q3 311 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 PACS1Q6VY07 963 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 TAS2R42Q7RTR8 314 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 TMPRSS9Q7Z410 1059 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 B3GNT8Q7Z7M8 397 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 CAND1Q86VP6 1230 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 SLITRK4Q8IW52 837 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 MDM1Q8TC05 714 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 ZCCHC14Q8WYQ9 949 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 ATXN7L3BQ96GX2 97 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 KIFC1Q9BW19 673 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 STN1Q9H668 368 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 CCDC86Q9H6F5 360 aaKnown RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 UCK1Q9HA47 277 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 SYBUQ9NX95 663 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 ZNF624Q9P2J8 865 aaPredicted RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 RNF14Q9UBS8 474 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 ATXN7L1Q9ULK2 861 aaPredicted RBP20.08■□□□□ 0.8
CCS-208ENST00000533244 WDR37Q9Y2I8 494 aa20.08■□□□□ 0.8
CCS-208ENST00000533244 APC2O95996 2303 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 CPNE6O95741 557 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 RPL10P27635 214 aaKnown RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 ALDH4A1P30038 563 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 SLC19A1P41440 591 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 DRG2P55039 364 aaKnown RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 ETF1P62495 437 aaKnown RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 GPLD1P80108 840 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 ZFP36L1Q07352 338 aaKnown RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 PTK6Q13882 451 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 SEPT7Q16181 437 aaKnown RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 ZNF658BQ4V348 819 aaPredicted RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 NAT8LQ8N9F0 302 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 OR4L1Q8NH43 312 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 SH3KBP1Q96B97 665 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 LIN37Q96GY3 246 aaPredicted RBP20.07■□□□□ 0.8
CCS-208ENST00000533244 POT1Q9NUX5 634 aa20.07■□□□□ 0.8
CCS-208ENST00000533244 C17orf113A0A1B0GUU1 675 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 LILRA5A6NI73 299 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 AP2A2O94973 939 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 MAGEA3P43357 314 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 TERF1P54274 439 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 EPHA4P54764 986 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 INHBCP55103 352 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 CYP4F3Q08477 520 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 CLCA4Q14CN2 919 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 ZNF761Q86XN6 746 aaPredicted RBP20.06■□□□□ 0.8
CCS-208ENST00000533244 TMEM74Q96NL1 305 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 SLC38A3Q99624 504 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 LDHAL6BQ9BYZ2 381 aaPredicted RBP20.06■□□□□ 0.8
CCS-208ENST00000533244 XAB2Q9HCS7 855 aaKnown RBP20.06■□□□□ 0.8
CCS-208ENST00000533244 KCNK4Q9NYG8 393 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 SOX13Q9UN79 622 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 DMXL2Q8TDJ6 3036 aa20.06■□□□□ 0.8
CCS-208ENST00000533244 OR52A4PA6NMU1 304 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 TMX2-CTNND1H3BSU7 103 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 CCDC188H7C350 402 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 AVILO75366 819 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 NMBRP28336 390 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 PBLDP30039 288 aaPredicted RBP20.05■□□□□ 0.8
CCS-208ENST00000533244 CSF2RBP32927 897 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 NSG1P42857 185 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 LSSP48449 732 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 PRAMEP78395 509 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 CFHR1Q03591 330 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 PPP1R7Q15435 360 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 AMZ1Q400G9 498 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 RNASEH2BQ5TBB1 312 aaKnown RBP20.05■□□□□ 0.8
CCS-208ENST00000533244 LYPLAL1Q5VWZ2 237 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 IGF2-ASQ6U949 168 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 CERS6Q6ZMG9 384 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 PROSER1Q86XN7 944 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 CLDN19Q8N6F1 224 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 OR6P1Q8NGX9 317 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 HM13Q8TCT9 377 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCS-208ENST00000533244 SERPINB12Q96P63 405 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 NUDT22Q9BRQ3 303 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 POLR1BQ9H9Y6 1135 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 RDH14Q9HBH5 336 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 ACSL5Q9ULC5 683 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 PIKFYVEQ9Y2I7 2098 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 KIF26BQ2KJY2 2108 aa20.05■□□□□ 0.8
CCS-208ENST00000533244 ACACAQ13085 2346 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 CCDC187A0A096LP49 1063 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 TAF4O00268 1085 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 DXOO77932 396 aaKnown RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 ARNTP27540 789 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 PAFAH1B1P43034 410 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 SEMA3AQ14563 771 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 MAP9Q49MG5 647 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 ZNF574Q6ZN55 896 aaPredicted RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 SYDE1Q6ZW31 735 aaPredicted RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 PIM3Q86V86 326 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 RBM12BQ8IXT5 1001 aaKnown RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 PPIL6Q8IXY8 311 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 PRR11Q96HE9 360 aaPredicted RBP20.04■□□□□ 0.8
CCS-208ENST00000533244 RUNDC3BQ96NL0 473 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 FOXP3Q9BZS1 431 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 SLC40A1Q9NP59 571 aa20.04■□□□□ 0.8
CCS-208ENST00000533244 PCDHGA8Q9Y5G5 932 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms