RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 AKT1P31749 480 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 CAPZBP47756 277 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 MARCKSL1P49006 195 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 CSRP3P50461 194 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 HADHBP55084 474 aaKnown RBP17.48■□□□□ 0.39
PCF11-206ENST00000533018 CDC20Q12834 499 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 MPP3Q13368 585 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 ITGA9Q13797 1035 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 DEFB109BQ30KR1 87 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 TMEM220Q6QAJ8 160 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 DAAM2Q86T65 1068 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 RASGEF1AQ8N9B8 481 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 STARD8Q92502 1023 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 QKIQ96PU8 341 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCF11-206ENST00000533018 C10orf88Q9H8K7 445 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 TRHDEQ9UKU6 1024 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 RPS6KL1Q9Y6S9 549 aa17.48■□□□□ 0.39
PCF11-206ENST00000533018 STX7O15400 261 aaKnown RBP17.47■□□□□ 0.39
PCF11-206ENST00000533018 KCNJ13O60928 360 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 DLGAP3O95886 979 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 AGTP01019 485 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 MSH3P20585 1137 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 DLSTP36957 453 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 STAT5AP42229 794 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 NAP1L1P55209 391 aaKnown RBP17.47■□□□□ 0.39
PCF11-206ENST00000533018 MC1RQ01726 317 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 IL11RAQ14626 422 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 PLCL1Q15111 1095 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 C6orf15Q6UXA7 325 aaPredicted RBP17.47■□□□□ 0.39
PCF11-206ENST00000533018 DET1Q7L5Y6 550 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 GALNT6Q8NCL4 622 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 STAMBPL1Q96FJ0 436 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 FERMT1Q9BQL6 677 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 LUC7LQ9NQ29 371 aaKnown RBP17.47■□□□□ 0.39
PCF11-206ENST00000533018 PCDHB3Q9Y5E6 796 aa17.47■□□□□ 0.39
PCF11-206ENST00000533018 MRPS18BQ9Y676 258 aaKnown RBP17.47■□□□□ 0.39
PCF11-206ENST00000533018 PRR19A6NJB7 356 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 KIAA0754O94854 1291 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 NDUFA10O95299 355 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 CCNYL3P0C7X3 344 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 ZNF28P17035 718 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 CTNNA2P26232 953 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 RBL1P28749 1068 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 OAS2P29728 719 aaKnown RBP17.46■□□□□ 0.39
PCF11-206ENST00000533018 CTSCP53634 463 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 GEMP55040 296 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 NFE2L1Q14494 772 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 PTPRCAPQ14761 206 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 FNBP1LQ5T0N5 605 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 GPRC6AQ5T6X5 926 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 ATP1A1-AS1Q5TC04 95 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 TC2NQ8N9U0 490 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 DDHD1Q8NEL9 900 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 DTX3LQ8TDB6 740 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 KRT35Q92764 455 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 FICDQ9BVA6 458 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 ZNF71Q9NQZ8 489 aaPredicted RBP17.46■□□□□ 0.39
PCF11-206ENST00000533018 IMP3Q9NV31 184 aaKnown RBP17.46■□□□□ 0.39
PCF11-206ENST00000533018 LNPEPQ9UIQ6 1025 aa17.46■□□□□ 0.39
PCF11-206ENST00000533018 C2orf81A6NN90 581 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 APOC4-APOC2K7ER74 178 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 TERTO14746 1132 aaKnown RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 KATNA1O75449 491 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 ANXA9O76027 345 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 PRAMEF1O95521 474 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 APOC2P02655 101 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 FECHP22830 423 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CA5AP35218 305 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 ARL4DP49703 201 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 XRCC4Q13426 336 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 MAP7Q14244 749 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 RPE65Q16518 533 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 LONRF2Q1L5Z9 754 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 ITPRIPL1Q6GPH6 555 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 C11orf63Q6NUN7 778 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CYB5D1Q6P9G0 228 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 KLHL35Q6PF15 583 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 FAM83HQ6ZRV2 1179 aaPredicted RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 BBS12Q6ZW61 710 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 PRSS42Q7Z5A4 293 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 PPP1R3BQ86XI6 285 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CCDC170Q8IYT3 715 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 GPR150Q8NGU9 434 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 ZNF398Q8TD17 642 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 APOBEC4Q8WW27 367 aaKnown RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 APOL2Q9BQE5 337 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 FAM8A1Q9UBU6 413 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 TUBD1Q9UJT1 453 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CROTQ9UKG9 612 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 ARL5AQ9Y689 179 aa17.45■□□□□ 0.38
PCF11-206ENST00000533018 CFAP20Q9Y6A4 193 aaKnown RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 DNMT3AQ9Y6K1 912 aaPredicted RBP17.45■□□□□ 0.38
PCF11-206ENST00000533018 HECTD1Q9ULT8 2610 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 UBR5O95071 2799 aaPredicted RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 SPAG6O75602 509 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 LCA5LO95447 670 aa17.44■□□□□ 0.38
PCF11-206ENST00000533018 LPOP22079 712 aaPredicted RBP17.44■□□□□ 0.38
PCF11-206ENST00000533018 PPP1CAP62136 330 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms