RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 VIPP01282 170 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 HOXB3P14651 431 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 ACRV1P26436 265 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 EIF2S3P41091 472 aaKnown RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 SLC19A1P41440 591 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 MLLT3P42568 568 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 PPM1FP49593 454 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 CDKN1CP49918 316 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 LIMK2P53671 638 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 EPHA4P54764 986 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 BASP1P80723 227 aaKnown RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 CFHR1Q03591 330 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 CACNG1Q06432 222 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 NFE2L1Q14494 772 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 BCL7AQ4VC05 210 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 FAM83HQ6ZRV2 1179 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 SERPINA9Q86WD7 417 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 TRIM48Q8IWZ4 208 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 OR4D9Q8NGE8 314 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 TMEM159Q96B96 161 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 CCDC97Q96F63 343 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 RANBP9Q96S59 729 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 OSBPL9Q96SU4 736 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 NAP1L3Q99457 506 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 ZMYND15Q9H091 742 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 UCK1Q9HA47 277 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 ZDHHC3Q9NYG2 299 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.09■□□□□ 0.01
CPSF1-210ENST00000532935 WDR37Q9Y2I8 494 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 LOXL2Q9Y4K0 774 aa15.09■□□□□ 0.01
CPSF1-210ENST00000532935 IGLV3-16A0A075B6K0 115 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 MGAT4DA6NG13 374 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 LILRA5A6NI73 299 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 OR52A4PA6NMU1 304 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 CDRT15L2A8MXV6 281 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 CFAP99D6REC4 459 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 AGRPO00253 132 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 PGRMC1O00264 195 aaKnown RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 RRP8O43159 456 aaKnown RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 ITGA2BP08514 1039 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 PRSS56P0CW18 603 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 HGFP14210 728 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 ATP1B2P14415 290 aaPredicted RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 ADRA1DP25100 572 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 HALP42357 657 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 ARSDP51689 593 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 PCBP4P57723 403 aaKnown RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 CLCA4Q14CN2 919 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 C16orf72Q14CZ0 275 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 TTC27Q6P3X3 843 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 TMEM26Q6ZUK4 368 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 TAS2R42Q7RTR8 314 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 PIANPQ8IYJ0 282 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 OR13J1Q8NGT2 312 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 OR2L2Q8NH16 312 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 COG1Q8WTW3 980 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 MAGOHBQ96A72 148 aaKnown RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 LINC00615Q96LM1 132 aaPredicted RBP15.08■□□□□ 0
CPSF1-210ENST00000532935 CCDC74BQ96LY2 380 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 CMKLR1Q99788 373 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 TBC1D10AQ9BXI6 508 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 AP1M1Q9BXS5 423 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 POT1Q9NUX5 634 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 SMARCAL1Q9NZC9 954 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 TMEM9Q9P0T7 183 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 RIMKLBQ9ULI2 386 aa15.08■□□□□ 0
CPSF1-210ENST00000532935 CCDC162PA2VCL2 907 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 KLHL33A6NCF5 533 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 OR51F1A6NGY5 319 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 USP27XA6NNY8 438 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 JMJD7P0C870 316 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 THRAP10827 490 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 MPSTP25325 297 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 MAPK9P45984 424 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 PRLHRP49683 370 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 TRA2AQ13595 282 aaKnown RBP eCLIP15.07■□□□□ 0
CPSF1-210ENST00000532935 DBN1Q16643 649 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 CYP1B1Q16678 543 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 KCTD19Q17RG1 926 aaPredicted RBP15.07■□□□□ 0
CPSF1-210ENST00000532935 TSTD2Q5T7W7 516 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 METRNLQ641Q3 311 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 TMEM71Q6P5X7 295 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 WDR74Q6RFH5 385 aaPredicted RBP15.07■□□□□ 0
CPSF1-210ENST00000532935 LRRC69Q6ZNQ3 347 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 NLRP9Q7RTR0 991 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 CLEC14AQ86T13 490 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 RCBTB1Q8NDN9 531 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 ZNF248Q8NDW4 579 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 PPHLN1Q8NEY8 458 aaKnown RBP15.07■□□□□ 0
CPSF1-210ENST00000532935 ACTRT1Q8TDG2 376 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 HNRNPLLQ8WVV9 542 aaKnown RBP15.07■□□□□ 0
CPSF1-210ENST00000532935 CXorf40BQ96DE9 158 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 EPB41L1Q9H4G0 881 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 KCND1Q9NSA2 647 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 AKAP7Q9P0M2 348 aaPredicted RBP15.07■□□□□ 0
CPSF1-210ENST00000532935 PISDQ9UG56 409 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 SLC2A6Q9UGQ3 507 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 SNX12Q9UMY4 172 aa15.07■□□□□ 0
CPSF1-210ENST00000532935 PSMD13Q9UNM6 376 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms