RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 CCDC86Q9H6F5 360 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 DHX33Q9H6R0 707 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 APOBEC3GQ9HC16 384 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 AASSQ9UDR5 926 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ZNF490Q9ULM2 529 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 WDR37Q9Y2I8 494 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MRPS17Q9Y2R5 130 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PRAMEF33A0A0G2JMD5 474 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ZSCAN5BA6NJL1 495 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 OR2AT4A6NND4 320 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 SLC33A1O00400 549 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 MID1O15344 667 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PRAMEF10O60809 474 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 POLR2JP52435 117 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 STXBP1P61764 594 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PARP15Q460N3 678 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 PIK3R6Q5UE93 754 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 POP5Q969H6 163 aaKnown RBP8.05□□□□□ -1.12
CTNND1-234ENST00000532844 FERD3LQ96RJ6 166 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 ALKBH4Q9NXW9 302 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 EDARQ9UNE0 448 aa8.05□□□□□ -1.12
CTNND1-234ENST00000532844 C1QTNF3-AMACRE9PGA6 284 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ABLIM1O14639 778 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TLL1O43897 1013 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 OR10H3O60404 316 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ZBTB11O95625 1053 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 C9P02748 559 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 SLC5A3P53794 718 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PHC1P78364 1004 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 DUSP28Q4G0W2 176 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PLCZ1Q86YW0 608 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ZZZ3Q8IYH5 903 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PDPRQ8NCN5 879 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CLEC4DQ8WXI8 215 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TFAP2BQ92481 460 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 FNDC11Q9BVV2 318 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 AJAP1Q9UKB5 411 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 MEMO1Q9Y316 297 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PIK3C2AO00443 1686 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 C5orf60A6NFR6 353 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 SUV39H1O43463 412 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PRKD3O94806 890 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 BMP7P18075 431 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 GDF10P55107 478 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 FSTL1Q12841 308 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TUSC3Q13454 348 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ZNHIT3Q15649 155 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 FAM76BQ5HYJ3 339 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 C6orf52Q5T4I8 152 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CPSF7Q8N684 471 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 FAM47BQ8NA70 645 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 OR2T12Q8NG77 320 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 OR4K2Q8NGD2 314 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 SUN3Q8TAQ9 357 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PTCD2Q8WV60 388 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 HDAC2Q92769 488 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CLIP3Q96DZ5 547 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TRNT1Q96Q11 434 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 COPS8Q99627 209 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 SSU72Q9NP77 194 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TREM1Q9NP99 234 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 GRHL1Q9NZI5 618 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 SUCOQ9UBS9 1254 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PSME2Q9UL46 239 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CAPN8A6NHC0 703 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 GPR25O00155 361 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CCRL2O00421 344 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 DHX15O43143 795 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 MSCO60682 206 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PTX3P26022 381 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 STOMP27105 288 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 UGT1A5P35504 534 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 MTHFRP42898 656 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CCNHP51946 323 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PGDP52209 483 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 LIMK2P53671 638 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TAF10Q12962 218 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 E2F2Q14209 437 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CARTPTQ16568 116 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CA9Q16790 459 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 CLEC6AQ6EIG7 209 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 EIF5AL1Q6IS14 154 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ANKS1BQ7Z6G8 1248 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 LDB1Q86U70 411 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TBC1D21Q8IYX1 336 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ADCY4Q8NFM4 1077 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 OR2T34Q8NGX1 318 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 OR2T3Q8NH03 318 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 NAT14Q8WUY8 206 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 IPCEF1Q8WWN9 437 aaPredicted RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 ACOT12Q8WYK0 555 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 PIGKQ92643 395 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 DIRAS2Q96HU8 199 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 KCNN2Q9H2S1 579 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 EIF3KQ9UBQ5 218 aaKnown RBP8.04□□□□□ -1.12
CTNND1-234ENST00000532844 STXBP5LQ9Y2K9 1186 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 TCAF1Q9Y4C2 921 aa8.04□□□□□ -1.12
CTNND1-234ENST00000532844 LTN1O94822 1766 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms