RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PIGVQ9NUD9 493 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 A0A1W2PPM1 405 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 STK16O75716 305 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PDE9AO76083 593 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 SYPP08247 313 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 PPIBP23284 216 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 EPHA3P29320 983 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 HFE2Q6ZVN8 426 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ULK2Q8IYT8 1036 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 NKD2Q969F2 451 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ZNF184Q99676 751 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 MRPS30Q9NP92 439 aaKnown RBP11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ALKBH4Q9NXW9 302 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 ERVK-11Q9UQG0 969 aa11.18□□□□□ -0.62
PTPRK-221ENST00000532331 RNF225M0QZC1 329 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SCN2BO60939 215 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ZMPSTE24O75844 475 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 KAT7O95251 611 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MED26O95402 600 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 LCA5LO95447 670 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 HLA-DQA2P01906 255 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CASRP41180 1078 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MANFP55145 182 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 DPYSL2Q16555 572 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PLEKHG4Q58EX7 1191 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 RNASEH2BQ5TBB1 312 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SLC9B2Q86UD5 537 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 Q8N9G6 341 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ZSCAN1Q8NBB4 408 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MOSPD2Q8NHP6 518 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MAGEE2Q8TD90 523 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SLC44A1Q8WWI5 657 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MIEF2Q96C03 454 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TCF12Q99081 682 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MIOSQ9NXC5 875 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SLC9A8Q9Y2E8 581 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TRAF6Q9Y4K3 522 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 RFXANKO14593 260 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ESR1P03372 595 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 KLK3P07288 261 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 C8GP07360 202 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PIM1P11309 404 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CHRNB2P17787 502 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 FGFR3P22607 806 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 HSD17B2P37059 387 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MLLT6P55198 1093 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PTSQ03393 145 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 COX10Q12887 443 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TRIQKQ629K1 86 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 OFCC1Q8IZS5 231 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 OR52E6Q96RD3 313 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TMEM209Q96SK2 561 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MCMBPQ9BTE3 642 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 R3HDM2Q9Y2K5 976 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 LYVE1Q9Y5Y7 322 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CHD4Q14839 1912 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 IQCF5A8MTL0 148 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SERPINB7O75635 380 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MATN4O95460 622 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 BPGMP07738 259 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ZNF30P17039 623 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 IDH2P48735 452 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 UBAP2LQ14157 1087 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ARMC4Q5T2S8 1044 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PDZK1Q5T2W1 519 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 LDB1Q86U70 411 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CUZD1Q86UP6 607 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SLC35F5Q8WV83 523 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 RBM18Q96H35 190 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CDH7Q9ULB5 785 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 N6AMT1Q9Y5N5 214 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ATP6AP2A0A1C7CYW4 349 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CCL22O00626 93 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 STX11O75558 287 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ATP6AP2O75787 350 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 OR6B1O95007 311 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 C2P06681 752 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 C16orf72Q14CZ0 275 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PON2Q15165 354 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 GPR33Q49SQ1 333 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 MED27Q6P2C8 311 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 ZNF563Q8TA94 476 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 SGIP1Q9BQI5 828 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 GPR174Q9BXC1 333 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 C6orf62Q9GZU0 229 aaPredicted RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 EXD2Q9NVH0 621 aa11.17□□□□□ -0.62
PTPRK-221ENST00000532331 PAIP2BQ9ULR5 123 aaKnown RBP11.17□□□□□ -0.62
PTPRK-221ENST00000532331 A8MU76 341 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 LYPLA1O75608 230 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-221ENST00000532331 CRHR1P34998 444 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 ACVRL1P37023 503 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 CDH13P55290 713 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
PTPRK-221ENST00000532331 CA9Q16790 459 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 TIMM50Q3ZCQ8 353 aa11.16□□□□□ -0.62
PTPRK-221ENST00000532331 SH3PXD2AQ5TCZ1 1133 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms