RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 ASPNQ9BXN1 380 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 TDRD1Q9BXT4 1180 aaKnown RBP5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 ADGRE3Q9BY15 652 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 CEP41Q9BYV8 373 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 OSBPL8Q9BZF1 889 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 ERVMER34-1Q9H9K5 563 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 LZTFL1Q9NQ48 299 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 CATSPERZQ9NTU4 200 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 PACSIN2Q9UNF0 486 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 CORO2BQ9UQ03 480 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 PCDHGB2Q9Y5G2 931 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 HS3ST3A1Q9Y663 406 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 CAPN6Q9Y6Q1 641 aa5.77□□□□□ -1.49
HMGB1P42-201ENST00000532126 SDK1Q7Z5N4 2213 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 GOLGA6L9A6NEM1 432 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 POM121BA6NF01 834 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 NPIPB15A6NHN6 443 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 HACD1B0YJ81 288 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 H7C0C1 242 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 LINC01387J3KSC0 135 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 TOR1BO14657 336 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 FLRT2O43155 660 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 TIPRLO75663 272 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 KRT37O76014 449 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RECQL5O94762 991 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 THBDP07204 575 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PDHA1P08559 390 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CYP2A6P11509 494 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CEACAM1P13688 526 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CTPS1P17812 591 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 LHCGRP22888 699 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PTPN3P26045 913 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 VIPR1P32241 457 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CD86P42081 329 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ATP5OP48047 213 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CLK1P49759 484 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 THOP1P52888 689 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 EIF3EP60228 445 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PFN3P60673 137 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RPL26P61254 145 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 YPEL5P62699 121 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 OTUD4Q01804 1114 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 WASHC5Q12768 1159 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 FOXO1Q12778 655 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RALGDSQ12967 914 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 XRCC4Q13426 336 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ARHGEF7Q14155 803 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PTK2BQ14289 1009 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 IHHQ14623 411 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ACOX1Q15067 660 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 NOMO1Q15155 1222 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 IRF4Q15306 451 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 SHBQ15464 509 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 WSCD2Q2TBF2 565 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 TEX44Q53QW1 395 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PRAMEF13Q5VWM6 474 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 DENND2CQ68D51 928 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 AADACL2Q6P093 401 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 LIPIQ6XZB0 460 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PID1Q7Z2X4 250 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PARGQ86W56 976 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CDKL3Q8IVW4 592 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC22A18ASQ8N1D0 253 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 GALNT15Q8N3T1 639 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 TP53I13Q8NBR0 393 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 LPCAT1Q8NF37 534 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ACTL9Q8TC94 416 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 NUDT8Q8WV74 236 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PIH1D2Q8WWB5 315 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 HTR3CQ8WXA8 447 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 WDR89Q96FK6 387 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 SCRN2Q96FV2 425 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 IMP4Q96G21 291 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 HES6Q96HZ4 224 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 BMFQ96LC9 184 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CAMK1GQ96NX5 476 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 QKIQ96PU8 341 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ALS2CR12Q96Q35 445 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 MCCC1Q96RQ3 725 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RBM15Q96T37 977 aaKnown RBP eCLIP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 VAT1Q99536 393 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 BARD1Q99728 777 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 FERMT1Q9BQL6 677 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 UNKQ9C0B0 810 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 SLC25A51Q9H1U9 297 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PCDH9Q9HC56 1237 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 MBNL1Q9NR56 388 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RAD18Q9NS91 495 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 KLHL8Q9P2G9 620 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 PCOLCE2Q9UKZ9 415 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 RPL26L1Q9UNX3 145 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CHKBQ9Y259 395 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 MAGED1Q9Y5V3 778 aaPredicted RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 ZNF292O60281 2723 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 CHD5Q8TDI0 1954 aa5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 TNRC6BQ9UPQ9 1833 aaKnown RBP5.76□□□□□ -1.49
HMGB1P42-201ENST00000532126 SPAG17Q6Q759 2223 aa5.75□□□□□ -1.49
HMGB1P42-201ENST00000532126 NYNRINQ9P2P1 1898 aaKnown RBP5.75□□□□□ -1.49
HMGB1P42-201ENST00000532126 PCDH15Q96QU1 1955 aa5.75□□□□□ -1.49
HMGB1P42-201ENST00000532126 ELOA3CA0A087WX78 387 aaPredicted RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms