RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 WSCD2Q2TBF2 565 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 KIAA1161Q6NSJ0 714 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 BRAT1Q6PJG6 821 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 LIPIQ6XZB0 460 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 RFLNAQ6ZTI6 216 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 KDELC2Q7Z4H8 507 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CLEC14AQ86T13 490 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 JAMLQ86YT9 394 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 RCOR2Q8IZ40 523 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 RBFAQ8N0V3 343 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CBARPQ8N350 705 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ARL14Q8N4G2 192 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 LRRC57Q8N9N7 239 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 TP53I13Q8NBR0 393 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PLA2G15Q8NCC3 412 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 KIAA1524Q8TCG1 905 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 LMX1AQ8TE12 382 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CXorf40AQ8TE69 158 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 NSMCE1Q8WV22 266 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PIH1D2Q8WWB5 315 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 HTR3CQ8WXA8 447 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ALG3Q92685 438 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 SGF29Q96ES7 293 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 LENG8Q96PV6 779 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 IL12RB2Q99665 862 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 FOXP3Q9BZS1 431 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 DDX56Q9NY93 547 aaKnown RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PACSIN2Q9UNF0 486 aaPredicted RBP6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CHKBQ9Y259 395 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ATP8A1Q9Y2Q0 1164 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 TTLL3Q9Y4R7 772 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 PCDHA3Q9Y5H8 950 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 UNC13CQ8NB66 2214 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 CSMD1Q96PZ7 3565 aa6.97□□□□□ -1.29
TRIM53CP-201ENST00000531490 hCG_1818297A0A087WSY0 165 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 SPTY2D1-AS1A0A0U1RR47 76 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 MACROD2A1Z1Q3 448 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 NEMP2A6NFY4 417 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZNF487B1APH4 448 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 FPGTO14772 594 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 PSTPIP1O43586 416 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 CLEC3AO75596 197 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 GCATO75600 419 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 PGLSO95336 258 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ALPIP09923 528 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 PYGMP11217 842 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 LHCGRP22888 699 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 IGFALSP35858 605 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 NUDT1P36639 197 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 MMP12P39900 470 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 GSDMDP57764 484 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 PFN3P60673 137 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 AP1S1P61966 158 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 POLR2LP62875 67 aaKnown RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 RALGDSQ12967 914 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 GRM3Q14832 879 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 TFDP3Q5H9I0 405 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 CFAP58Q5T655 872 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 DENND2CQ68D51 928 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 KCTD16Q68DU8 428 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 TIGD7Q6NT04 549 aaPredicted RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 C11orf63Q6NUN7 778 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 TMC3Q7Z5M5 1100 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 KIAA1328Q86T90 577 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 TSPAN33Q86UF1 283 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 NT5DC3Q86UY8 548 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZC3H18Q86VM9 953 aaKnown RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZFAND4Q86XD8 727 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 VSIG1Q86XK7 387 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 LRRC8AQ8IWT6 810 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 SLC35F3Q8IY50 421 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 CCDC13Q8IYE1 715 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 KATNAL2Q8IYT4 538 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 EXD1Q8NHP7 514 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 SPATA22Q8NHS9 363 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 WDR36Q8NI36 951 aaKnown RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 JPH3Q8WXH2 748 aaPredicted RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ASB12Q8WXK4 309 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 FATE1Q969F0 183 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 HAUS1Q96CS2 278 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 HDAC11Q96DB2 347 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 LIN37Q96GY3 246 aaPredicted RBP6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 AGAP3Q96P47 875 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 OLFM3Q96PB7 478 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 FAM118BQ9BPY3 351 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 EPN3Q9H201 632 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 EPB41L5Q9HCM4 733 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 GPR27Q9NS67 375 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 B4GALT6Q9UBX8 382 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 MAN2B2Q9Y2E5 1009 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 ZKSCAN5Q9Y2L8 839 aa6.96□□□□□ -1.29
TRIM53CP-201ENST00000531490 CCDC187A0A096LP49 1063 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 EME2A4GXA9 379 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 NPIPB15A6NHN6 443 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 PLD2O14939 933 aa6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 RECQL5O94762 991 aaPredicted RBP6.95□□□□□ -1.3
TRIM53CP-201ENST00000531490 IPO7O95373 1038 aaKnown RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms