RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 ACP5P13686 325 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 ACP1P24666 158 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 ACTR1BP42025 376 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 ACTR1AP61163 376 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 PDIA2Q13087 525 aaKnown RBP14.23□□□□□ -0.13
CPSF1-206ENST00000531480 TRIP6Q15654 476 aaKnown RBP14.23□□□□□ -0.13
CPSF1-206ENST00000531480 TEX35Q5T0J7 233 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 AGAP9Q5VTM2 703 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 CRTC3Q6UUV7 619 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 GALNT7Q86SF2 657 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 RELL1Q8IUW5 271 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 IFT20Q8IY31 132 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 SLC35F3Q8IY50 421 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 NAGSQ8N159 534 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 ARL10Q8N8L6 244 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 PNPLA1Q8N8W4 532 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 DEFB124Q8NES8 71 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 OR2L2Q8NH16 312 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 EPB41L5Q9HCM4 733 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 MOCS1Q9NZB8 636 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 FTSJ1Q9UET6 329 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 CHMP2BQ9UQN3 213 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 PRSS21Q9Y6M0 314 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 ASXL3Q9C0F0 2248 aa14.23□□□□□ -0.13
CPSF1-206ENST00000531480 UQCRHLA0A096LP55 91 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 EME2A4GXA9 379 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 PRMT5O14744 637 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 OR1I1O60431 355 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 POP7O75817 140 aaKnown RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 LDOC1O95751 146 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 S1PR4O95977 384 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 UQCRHP07919 91 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CKMT2P17540 419 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 HLTFQ14527 1009 aaKnown RBP eCLIP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 RNF187Q5TA31 235 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 METRNLQ641Q3 311 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 ZNF449Q6P9G9 518 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 SLC30A9Q6PML9 568 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 ABRAXAS1Q6UWZ7 409 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CEP128Q6ZU80 1094 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 AMZ2Q86W34 360 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 LRRC6Q86X45 466 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 ZBED8Q8IZ13 594 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 SFRP1Q8N474 314 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CLDN19Q8N6F1 224 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 FBXO36Q8NEA4 188 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 FAM46DQ8NEK8 389 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 LPGAT1Q92604 370 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CERS2Q96G23 380 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 CNDP2Q96KP4 475 aaKnown RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 BIRC8Q96P09 236 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 FAM167BQ9BTA0 163 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 TSPYL1Q9H0U9 437 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 KLC4Q9NSK0 619 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 INTS10Q9NVR2 710 aaKnown RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 IL1RAPL1Q9NZN1 696 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 TBC1D29Q9UFV1 150 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 DOLKQ9UPQ8 538 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 KCNK6Q9Y257 313 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 PCDHGA1Q9Y5H4 931 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 COL27A1Q8IZC6 1860 aaPredicted RBP14.22□□□□□ -0.13
CPSF1-206ENST00000531480 RP1P56715 2156 aa14.22□□□□□ -0.13
CPSF1-206ENST00000531480 GOLGA8KD6RF30 607 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 GOLGA8TH3BQL2 631 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 EML2O95834 649 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 GP1BAP07359 652 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 GSTA2P09210 222 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 F3P13726 295 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 VCLP18206 1134 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 ACADVLP49748 655 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 ILKQ13418 452 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 CUL1Q13616 776 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 NR1D2Q14995 579 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 INSCQ1MX18 579 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 ZNF470Q6ECI4 717 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 IYDQ6PHW0 289 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 FAM83HQ6ZRV2 1179 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 DET1Q7L5Y6 550 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 ZNF438Q7Z4V0 828 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 SDCCAG8Q86SQ7 713 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 LDB1Q86U70 411 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 KCNMB4Q86W47 210 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 UNC5BQ8IZJ1 945 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 BEND7Q8N7W2 519 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 EIF1ADQ8N9N8 165 aaKnown RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 KYQ8NBH2 561 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 C2CD4AQ8NCU7 369 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 OR6C4Q8NGE1 309 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 GSDMBQ8TAX9 411 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 HM13Q8TCT9 377 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 ZDHHC1Q8WTX9 485 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 NAT14Q8WUY8 206 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 CCM2Q9BSQ5 444 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 C20orf96Q9NUD7 363 aaPredicted RBP14.21□□□□□ -0.13
CPSF1-206ENST00000531480 VPS9D1Q9Y2B5 631 aa14.21□□□□□ -0.13
CPSF1-206ENST00000531480 OR5K4A6NMS3 321 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 GIPC1O14908 333 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 C1QAP02745 245 aa14.2□□□□□ -0.14
CPSF1-206ENST00000531480 OR56A5P0C7T3 313 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms