RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PWWP2BQ6NUJ5 590 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 FAM83HQ6ZRV2 1179 aaPredicted RBP18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 TTC30BQ8N4P2 665 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 RASGEF1AQ8N9B8 481 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 SIDT2Q8NBJ9 832 aaKnown RBP18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 RAB33BQ9H082 229 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 DEF6Q9H4E7 631 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 ACTL8Q9H568 366 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A7Q9HAW7 530 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A10Q9HAW8 530 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 UGT1A8Q9HAW9 530 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 IL26Q9NPH9 171 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 HYOU1Q9Y4L1 999 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 PCDHGA6Q9Y5G7 932 aa18.05■□□□□ 0.48
SSSCA1-206ENST00000531405 PIKFYVEQ9Y2I7 2098 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 GOLGA6L19H0YKK7 550 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 BUD23O43709 281 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 NTRK1P04629 796 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 EBLN1P0CF75 366 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 GP1BBP13224 206 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 ZFXP17010 805 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 NFKB1P19838 968 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 FECHP22830 423 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 PBLDP30039 288 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 CD68P34810 354 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 HMGCLP35914 325 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 RPS18P62269 152 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 PRKD1Q15139 912 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 LLGL1Q15334 1064 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 CHRNA6Q15825 494 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 RPE65Q16518 533 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 SIRPB2Q5JXA9 342 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 FAM199XQ6PEV8 388 aaPredicted RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 KDELC1Q6UW63 502 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 MFSD7Q6UXD7 560 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 FAM151BQ6UXP7 276 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 AMZ2Q86W34 360 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 VSIG1Q86XK7 387 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 FAM26EQ8N5C1 309 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 SLC25A41Q8N5S1 370 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 SLC41A2Q96JW4 573 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 TEKT5Q96M29 485 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 TTC25Q96NG3 672 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 TRIM55Q9BYV6 548 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 XPO4Q9C0E2 1151 aaKnown RBP18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 PDE7BQ9NP56 450 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 RARRES3Q9UL19 164 aa18.04■□□□□ 0.48
SSSCA1-206ENST00000531405 OR2AG2A6NM03 316 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 POP7O75817 140 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 MT-ND3P03897 115 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 PECAM1P16284 738 aaPredicted RBP18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 WNT3AP56704 352 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 NFE2L1Q14494 772 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 PLCL1Q15111 1095 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 BRSK1Q8TDC3 778 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 NAT14Q8WUY8 206 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 UBXN4Q92575 508 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 SRPK1Q96SB4 655 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 MAP3K3Q99759 626 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 SEMA5BQ9P283 1151 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 FAM153AQ9UHL3 310 aa18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 CFAP20Q9Y6A4 193 aaKnown RBP18.03■□□□□ 0.48
SSSCA1-206ENST00000531405 ESPL1Q14674 2120 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 LOC285095A0A1B0GVY8 99 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 SEC16AO15027 2179 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 AKR1B10O60218 316 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 SPAM1P38567 509 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 ARHGAP25P42331 645 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 CD97P48960 835 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 DMPKQ09013 629 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 WASHC5Q12768 1159 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 PPP2R5EQ16537 467 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 ODF2Q5BJF6 829 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 CPZQ66K79 652 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 DUS1LQ6P1R4 473 aaKnown RBP18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 TMEM220Q6QAJ8 160 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 ATCAYQ86WG3 371 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 BEND7Q8N7W2 519 aaPredicted RBP18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 BLOC1S5Q8TDH9 187 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 DNAJC7Q99615 494 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 IMP3Q9NV31 184 aaKnown RBP18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 IL17CQ9P0M4 197 aa18.02■□□□□ 0.48
SSSCA1-206ENST00000531405 FER1L5A0AVI2 2057 aa18.02■□□□□ 0.47
SSSCA1-206ENST00000531405 CENPEQ02224 2701 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 GLYATL1P3A0A0U1RQE8 302 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 BLACEA4D250 179 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 C21orf140B9A014 251 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 GAPDHSO14556 408 aaPredicted RBP18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 UQCRFS1P47985 274 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 CHAF1BQ13112 559 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 SEMA5AQ13591 1074 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 PTPRCAPQ14761 206 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 DNTTIP2Q5QJE6 756 aaKnown RBP18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 LDLRAP1Q5SW96 308 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 GPRC6AQ5T6X5 926 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 LRRC38Q5VT99 294 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 CYB5D1Q6P9G0 228 aa18.01■□□□□ 0.47
SSSCA1-206ENST00000531405 DET1Q7L5Y6 550 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms