RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 METTL15A6NJ78 407 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 HACD1B0YJ81 288 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 KRBOX1C9JBD0 128 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 E5RI56 91 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 STX16O14662 325 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 INPPL1O15357 1258 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CFLARO15519 480 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 HUS1O60921 280 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NIPSNAP2O75323 286 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 H2AFYO75367 372 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 TNFRSF21O75509 655 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PDE9AO76083 593 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CELF2O95319 508 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 LYPLA2O95372 231 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TOP3BO95985 862 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 CYP11A1P05108 521 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CYP3A4P08684 503 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RBP1P09455 135 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ADORA3P0DMS8 318 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PRKAR1AP10644 381 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ZNF250P15622 560 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RPS2P15880 293 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 TCF4P15884 667 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 FSTP19883 344 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 MSH3P20585 1137 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CHMP24386 653 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CRHBPP24387 322 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NR2F2P24468 414 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 DNAJA1P31689 397 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 RPL35P42766 123 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 GSTM5P46439 218 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RPS9P46781 194 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 SERPINB9P50453 376 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ARSEP51690 589 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 AKR1D1P51857 326 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PKNOX1P55347 436 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PER3P56645 1201 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PSMC5P62195 406 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ERVK-8P63133 956 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ACY1Q03154 408 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 MVKQ03426 396 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GPS1Q13098 491 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GRB10Q13322 594 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 BTN1A1Q13410 526 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ERV3-1Q14264 604 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NFIXQ14938 502 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GRK1Q15835 563 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 KIF19Q2TAC6 998 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 COL28A1Q2UY09 1125 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ADPRMQ3LIE5 342 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 SPATS1Q496A3 300 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TMEM119Q4V9L6 283 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CYBRD1Q53TN4 286 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 COLEC12Q5KU26 742 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PDSS1Q5T2R2 415 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 MBLAC2Q68D91 279 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PYHIN1Q6K0P9 492 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PMF1Q6P1K2 205 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 EPGNQ6UW88 154 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ZYG11AQ6WRX3 759 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 C16orf86Q6ZW13 317 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 USP45Q70EL2 814 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 UTS2BQ765I0 119 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 CEP68Q76N32 757 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 KRT74Q7RTS7 529 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 OVCH2Q7RTZ1 564 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 EFL1Q7Z2Z2 1120 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 P2RY8Q86VZ1 359 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ZFPM1Q8IX07 1006 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 DCP1BQ8IZD4 617 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 UNC5BQ8IZJ1 945 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 PPM1NQ8N819 430 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GLB1L3Q8NCI6 653 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 TTC16Q8NEE8 873 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 SRFBP1Q8NEF9 429 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 FAM83FQ8NEG4 500 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 OR8H1Q8NGG4 311 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NDNFQ8TB73 568 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ST8SIA2Q92186 375 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 ATOH1Q92858 354 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 RBPMSQ93062 196 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 SLCO4A1Q96BD0 722 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 TUBGCP3Q96CW5 907 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RCN3Q96D15 328 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 YIPF6Q96EC8 236 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 FBXL20Q96IG2 436 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 VPS39Q96JC1 886 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 UBXN10Q96LJ8 280 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 HYLS1Q96M11 299 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 GPR137Q96N19 417 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 RDH12Q96NR8 316 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 LENG8Q96PV6 779 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 ZNF300Q96RE9 604 aaPredicted RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 DCLRE1CQ96SD1 692 aaKnown RBP5.75□□□□□ -1.49
CD44-225ENST00000527326 DPYSL5Q9BPU6 564 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 FAM118BQ9BPY3 351 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 FAM213AQ9BRX8 229 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 MECRQ9BV79 373 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 BCL2L14Q9BZR8 327 aa5.75□□□□□ -1.49
CD44-225ENST00000527326 NXF2Q9GZY0 626 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms