RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 UBXN7O94888 489 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 PRAMEF1O95521 474 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 C9P02748 559 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TPH1P17752 444 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 PPM1FP49593 454 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF140P52738 457 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 CYP4F2P78329 520 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TMPRSS15P98073 1019 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 DMPKQ09013 629 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 C19orf57Q0VDD7 668 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 KIF5AQ12840 1032 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 GTF2H3Q13889 308 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 GPR18Q14330 331 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 NFE2L1Q14494 772 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 RPE65Q16518 533 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TAF1BQ53T94 588 aaPredicted RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 MANEAQ5SRI9 462 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 LDLRAP1Q5SW96 308 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TMEM164Q5U3C3 297 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 DET1Q7L5Y6 550 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 AMZ2Q86W34 360 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 EXD3Q8N9H8 876 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM71DQ8N9W8 422 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 GPR150Q8NGU9 434 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 SLC35B2Q8TB61 432 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 RSC1A1Q92681 617 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 RTP4Q96DX8 246 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 RNF31Q96EP0 1072 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 C9orf72Q96LT7 481 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TBL1YQ9BQ87 522 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 ZMYND15Q9H091 742 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 FAM96AQ9H5X1 160 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 ARNT2Q9HBZ2 717 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 POT1Q9NUX5 634 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 SIDT1Q9NXL6 827 aaKnown RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 IMPACTQ9P2X3 320 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 PSMD13Q9UNM6 376 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 AAR2Q9Y312 384 aaKnown RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 PCDHGA4Q9Y5G9 962 aa10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 TLN1Q9Y490 2541 aaKnown RBP10.24□□□□□ -0.77
PRPF40B-204ENST00000527253 C2orf81A6NN90 581 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 MIF4GDA9UHW6 222 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 STMND1H3BQB6 276 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 CAPN5O15484 640 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 STK10O94804 968 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 ANKRD34CP0C6C1 535 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PRSS56P0CW18 603 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PBLDP30039 288 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TNNT3P45378 269 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 CDKN1CP49918 316 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PPP1CAP62136 330 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 ITGA9Q13797 1035 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PRPSAP1Q14558 356 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PARP6Q2NL67 630 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 FNBP1LQ5T0N5 605 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 DCAF12Q5T6F0 453 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 METRNLQ641Q3 311 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TIPARPQ7Z3E1 657 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TRIM48Q8IWZ4 208 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TAB3Q8N5C8 712 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 LILRA3Q8N6C8 439 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 UBL4BQ8N7F7 174 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 AVL9Q8NBF6 648 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 ATG4AQ8WYN0 398 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TTC25Q96NG3 672 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TGM7Q96PF1 710 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 INSM2Q96T92 566 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 TMEM121Q9BTD3 319 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 EPB41L1Q9H4G0 881 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 ASB8Q9H765 288 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 FBXO8Q9NRD0 319 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PIH1D1Q9NWS0 290 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PILRAQ9UKJ1 303 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 PCDHB11Q9Y5F2 797 aa10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 DNMT3AQ9Y6K1 912 aaPredicted RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF106Q9H2Y7 1883 aaKnown RBP10.23□□□□□ -0.77
PRPF40B-204ENST00000527253 SPTA1P02549 2419 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 RAD1O60671 282 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 KCNJ13O60928 360 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 LIFP15018 202 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 ZNF28P17035 718 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 AMD1P17707 334 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 VCLP18206 1134 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 MSH3P20585 1137 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 CETN2P41208 172 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 SEPHS1P49903 392 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 RAB15P59190 212 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 SH3BP2P78314 561 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 TBR1Q16650 682 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 BCL7AQ4VC05 210 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 DUS1LQ6P1R4 473 aaKnown RBP10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 PRUNE1Q86TP1 453 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 PLXDC1Q8IUK5 500 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 SYCE1Q8N0S2 351 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 TTC13Q8NBP0 860 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 CCDC112Q8NEF3 446 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 SPDYE1Q8NFV5 336 aaPredicted RBP10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 EXTL1Q92935 676 aa10.22□□□□□ -0.77
PRPF40B-204ENST00000527253 CXorf40BQ96DE9 158 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms