RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CDH18Q13634 790 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 RAB33AQ14088 237 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 SPATS1Q496A3 300 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 TBCELQ5QJ74 424 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 CERS6Q6ZMG9 384 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 EPHX4Q8IUS5 362 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 FAM217AQ8IXS0 508 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 REM2Q8IYK8 340 aaPredicted RBP17.34■□□□□ 0.37
USH1C-205ENST00000527020 AUTS2Q8WXX7 1259 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 TRIM4Q9C037 500 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 AGPAT4Q9NRZ5 378 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 PLXNB3Q9ULL4 1909 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 AURKCQ9UQB9 309 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 CPQQ9Y646 472 aa17.34■□□□□ 0.37
USH1C-205ENST00000527020 CCDC154A6NI56 674 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 PLOD2O00469 737 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 CAPN1P07384 714 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ATP6V1B1P15313 513 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ITGB6P18564 788 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 DEFB115Q30KQ5 88 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 NADK2Q4G0N4 442 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 TIGD2Q4W5G0 525 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 NHSL2Q5HYW2 709 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ZBTB49Q6ZSB9 765 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ADAMTSL2Q86TH1 951 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 PTRH1Q86Y79 214 aaKnown RBP17.33■□□□□ 0.37
USH1C-205ENST00000527020 SLC39A11Q8N1S5 342 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 FNDC5Q8NAU1 212 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 GOLM1Q8NBJ4 401 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 CCT7Q99832 543 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 TRIM15Q9C019 465 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ACTL8Q9H568 366 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 HEBP1Q9NRV9 189 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 INTS7Q9NVH2 962 aaKnown RBP17.33■□□□□ 0.37
USH1C-205ENST00000527020 RIC8BQ9NVN3 520 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 ELOVL2Q9NXB9 296 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 CLEC4EQ9ULY5 219 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 INSL5Q9Y5Q6 135 aa17.33■□□□□ 0.37
USH1C-205ENST00000527020 LAMA2P24043 3122 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 TCRBV5S2A0A599 114 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 ARHGAP10A1A4S6 786 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 FAM234BA2RU67 622 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 DLGAP1O14490 977 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 VILLO15195 856 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 HNRNPRO43390 633 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 SYNCRIPO60506 623 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 TRBC1P01850 177 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 MTHFD1P11586 935 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 LIPEQ05469 1076 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 INPP5AQ14642 412 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 TMCO2Q7Z6W1 182 aaPredicted RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 ZFAND4Q86XD8 727 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 PDPRQ8NCN5 879 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 OR4F6Q8NGB9 312 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 TMEM74Q96NL1 305 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 HBEGFQ99075 208 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 HERC2P3Q9BVR0 1158 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 GRIP2Q9C0E4 1043 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 CLPBQ9H078 707 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 RBM38Q9H0Z9 239 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 ALG2Q9H553 416 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 NSUN3Q9H649 340 aaKnown RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 IL26Q9NPH9 171 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 NDUFA13Q9P0J0 144 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
USH1C-205ENST00000527020 SLC4A7Q9Y6M7 1214 aa17.33■□□□□ 0.36
USH1C-205ENST00000527020 TRBV5-4A0A0C4DH59 114 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 C1orf232A0A0U1RR37 186 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 FAM149AA5PLN7 773 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TAPBPO15533 448 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 FFAR2O15552 330 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ZNF821O75541 412 aaPredicted RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 ATN1P54259 1190 aaPredicted RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 TRAF3Q13114 568 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 NFATC2Q13469 925 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 GTF2H2Q13888 395 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ATP6AP1LQ52LC2 224 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 PTRHD1Q6GMV3 140 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 GTF2H2CQ6P1K8 395 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 FRA10AC1Q70Z53 315 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 IFNEQ86WN2 208 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 TCEAL8Q8IYN2 117 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 CLDN19Q8N6F1 224 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 METTL6Q8TCB7 284 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 VOPP1Q96AW1 172 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ISG20Q96AZ6 181 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 RPL10LQ96L21 214 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 C17orf80Q9BSJ5 609 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 ZFYVE1Q9HBF4 777 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 PFDN4Q9NQP4 134 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 PTBP2Q9UKA9 531 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 PADI4Q9UM07 663 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 USP22Q9UPT9 525 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 SAC3D1A6NKF1 404 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 LSM1O15116 133 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 CLDN7O95471 211 aa17.32■□□□□ 0.36
USH1C-205ENST00000527020 MYCP01106 439 aaPredicted RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 CNPP09543 421 aaKnown RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 ZNF7P17097 686 aaPredicted RBP17.32■□□□□ 0.36
USH1C-205ENST00000527020 PSMA4P25789 261 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms