RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 RPL10LQ96L21 214 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 PLEKHG4BQ96PX9 1271 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 BOCQ9BWV1 1114 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 CIPCQ9C0C6 399 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 TIMM22Q9Y584 194 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 TNPO3Q9Y5L0 923 aaKnown RBP13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 AP4B1Q9Y6B7 739 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
LDLRAD3-202ENST00000524419 PLXNB3Q9ULL4 1909 aa13.58□□□□□ -0.23
LDLRAD3-202ENST00000524419 E2F3O00716 465 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 GRM6O15303 877 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 RAD51BO15315 384 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 MATN4O95460 622 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 FGF19O95750 216 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 LINC00271P0C7V0 271 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 BMP1P13497 986 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ITGB6P18564 788 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 TCN1P20061 433 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 GJA8P48165 433 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 SH3BGRP55822 239 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 HTRA4P83105 476 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ECT2LQ008S8 904 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CHRNA6Q15825 494 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 MYLK3Q32MK0 819 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 FUT11Q495W5 492 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 SAMD4BQ5PRF9 694 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 C8orf82Q6P1X6 216 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 LAYNQ6UX15 382 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ZSWIM9Q86XI8 627 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 AHI1Q8N157 1196 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CBARPQ8N350 705 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CCDC97Q96F63 343 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 TCF25Q9BQ70 676 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 RIC8BQ9NVN3 520 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CD300AQ9UGN4 299 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 HS3ST2Q9Y278 367 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 PIKFYVEQ9Y2I7 2098 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 NPIPB15A6NHN6 443 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ANGPT2O15123 496 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 RNASEH2AO75792 299 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 SMIM18P0DKX4 95 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 DGKAP23743 735 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 DDX6P26196 483 aaKnown RBP eCLIP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 PRDX3P30048 256 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ATXN3P54252 364 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 PTPN5P54829 565 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 RHDQ02161 417 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 MAP7D1Q3KQU3 841 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 XKR7Q5GH72 579 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 IRAK1BP1Q5VVH5 260 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 USP45Q70EL2 814 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ZBTB2Q8N680 514 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 LKAAEAR1Q8TD35 194 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CLP1Q92989 425 aaKnown RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 LYSMD1Q96S90 227 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CCT7Q99832 543 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 ZNF696Q9H7X3 374 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 SDR39U1Q9NRG7 319 aaPredicted RBP13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 HCFC1R1Q9NWW0 138 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 UBAP1Q9NZ09 502 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 TMEM181Q9P2C4 612 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 CCL26Q9Y258 94 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 PRSS21Q9Y6M0 314 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 COMMD3-BMI1R4GMX3 469 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 DOCK6Q96HP0 2047 aa13.58□□□□□ -0.24
LDLRAD3-202ENST00000524419 A8MX80 341 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 BNIP3LO60238 219 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 OR4F21O95013 312 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 CSPG5O95196 566 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 SLC25A14O95258 325 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 TRIM16O95361 564 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 TNFAIP8O95379 198 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 PRR35P0CG20 571 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 UGT1A6P19224 532 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 UGT1A1P22309 533 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 UGT1A4P22310 534 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 HLA-FP30511 346 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 CA5AP35218 305 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 UGT1A3P35503 534 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 UGT1A5P35504 534 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 ARL1P40616 181 aaPredicted RBP13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 CCR2P41597 374 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 RALGDSQ12967 914 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 PCBP2Q15366 365 aaKnown RBP eCLIP13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 IL23RQ5VWK5 629 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 PLPP4Q5VZY2 271 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 CRTC1Q6UUV9 634 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 SBSNQ6UWP8 590 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 TPRG1Q6ZUI0 275 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 TSPAN33Q86UF1 283 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 NXPE1Q8N323 547 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 FAM156AQ8NDB6 213 aa13.57□□□□□ -0.24
LDLRAD3-202ENST00000524419 NAT14Q8WUY8 206 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms