RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, human

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-222	ENST00000524226	IFNA6	P05013	189 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	IFNA16	P05015	189 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	UMPS	P11172	480 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	HDC	P19113	662 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MNDA	P41218	407 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CPA2	P48052	419 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	EFEMP1	Q12805	493 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	EIF2S3L	Q2VIR3	472 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	FNBP1L	Q5T0N5	605 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	COL13A1	Q5TAT6	717 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	OLFML2A	Q68BL7	652 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	NCBP2-AS2	Q69YL0	99 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ERICH5	Q6P6B1	374 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TUBA3E	Q6PEY2	450 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PLET1	Q6UQ28	207 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TMPRSS11A	Q6ZMR5	421 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RIPOR1	Q6ZS17	1223 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	NANOGNB	Q7Z5D8	188 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MILR1	Q7Z6M3	343 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MTDH	Q86UE4	582 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	CACUL1	Q86Y37	369 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ARMC8	Q8IUR7	673 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SPAG16	Q8N0X2	631 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SIX5	Q8N196	739 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FNDC5	Q8NAU1	212 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PCDH19	Q8TAB3	1148 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	HM13	Q8TCT9	377 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ADAMTS19	Q8TE59	1207 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	POF1B	Q8WVV4	589 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CKAP2	Q8WWK9	683 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PIK3R3	Q92569	461 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TLCD1	Q96CP7	247 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FUBP3	Q96I24	572 aa	Known RBP eCLIP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	PIWIL1	Q96J94	861 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	RNF145	Q96MT1	663 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FRMD6	Q96NE9	622 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ZNF607	Q96SK3	696 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SMO	Q99835	787 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FAM126A	Q9BYI3	521 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	RHOBTB2	Q9BYZ6	727 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CXCL16	Q9H2A7	254 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	EHD1	Q9H4M9	534 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PTGFRN	Q9P2B2	879 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ATXN10	Q9UBB4	475 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	LGALS13	Q9UHV8	139 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	VANGL2	Q9ULK5	521 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PNMA8B	Q9ULN7	279 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	INVS	Q9Y283	1065 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MTF2	Q9Y483	593 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	NFS1	Q9Y697	457 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	BHMG1	C9JSJ3	638 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	PEX12	O00623	359 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FCHO1	O14526	889 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	UGT2B11	O75310	529 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	BANF1	O75531	89 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CCNYL3	P0C7X3	344 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ITIH1	P19827	911 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CDH3	P22223	829 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MMP13	P45452	471 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	HCAR3	P49019	387 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	AKR1D1	P51857	326 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SRP54	P61011	504 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	IFI35	P80217	286 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	SULT2A1	Q06520	285 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	DSC3	Q14574	896 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PDGFRL	Q15198	375 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SNAP47	Q5SQN1	464 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	PHF19	Q5T6S3	580 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MARC1	Q5VT66	337 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TRIM40	Q6P9F5	258 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	ULK3	Q6PHR2	472 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CYP20A1	Q6UW02	462 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TMC8	Q8IU68	726 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SYT12	Q8IV01	421 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	RASGRP3	Q8IV61	690 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	PM20D2	Q8IYS1	436 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CMTR2	Q8IYT2	770 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	POC5	Q8NA72	575 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SRFBP1	Q8NEF9	429 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	TSPAN14	Q8NG11	270 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PNPT1	Q8TCS8	783 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	CXorf40B	Q96DE9	158 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SERAC1	Q96JX3	654 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	PWWP2A	Q96N64	755 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	FAM129B	Q96TA1	746 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TBL1Y	Q9BQ87	522 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	AIFM2	Q9BRQ8	373 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	TRMO	Q9BU70	441 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	C3orf14	Q9HBI5	128 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	EIF2B3	Q9NR50	452 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	ARHGEF4	Q9NR80	690 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	XPR1	Q9UBH6	696 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	OPTC	Q9UBM4	332 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	SUCO	Q9UBS9	1254 aa	Known RBP	2.56	□□□□□ -2
PCM1-222	ENST00000524226	FETUB	Q9UGM5	382 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CIDEB	Q9UHD4	219 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	CDH7	Q9ULB5	785 aa		2.56	□□□□□ -2
PCM1-222	ENST00000524226	MRPS33	Q9Y291	106 aa	Known RBP	2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms