RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 SNX2O60749 519 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 AP2A2O94973 939 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZSCAN5DPP0CG00 497 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 ATP1B2P14415 290 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 TCP1P17987 556 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 RBMS1P29558 406 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 EIF2S3P41091 472 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 SLC19A1P41440 591 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 HALP42357 657 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 KCNJ1P48048 391 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 SEPT6Q14141 434 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 C3orf38Q5JPI3 329 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 TSTD2Q5T7W7 516 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 LYPLAL1Q5VWZ2 237 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 TMEM71Q6P5X7 295 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZNF574Q6ZN55 896 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 RAB11FIP2Q7L804 512 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 TMPRSS9Q7Z410 1059 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 TAB3Q8N5C8 712 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 OR13J1Q8NGT2 312 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 MAGOHBQ96A72 148 aaKnown RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 SGF29Q96ES7 293 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 VPS37BQ9H9H4 285 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 SLC40A1Q9NP59 571 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 AKAP7Q9P0M2 348 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZNF624Q9P2J8 865 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 ATXN7L1Q9ULK2 861 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 DNAJC16Q9Y2G8 782 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 RAXQ9Y2V3 346 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 NBEAQ8NFP9 2946 aa20.51■□□□□ 0.87
TRAPPC9-215ENST00000524162 PDZK1P1A8MUH7 402 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 VIPP01282 170 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 GRIA1P42261 906 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 NPY2RP49146 381 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 FNTAP49354 379 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 PCBP4P57723 403 aaKnown RBP20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 TMPRSS15P98073 1019 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 PLA2G4EQ3MJ16 856 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 AMZ1Q400G9 498 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 PCID2Q5JVF3 399 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 FNBP1LQ5T0N5 605 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 PACS1Q6VY07 963 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 CERS6Q6ZMG9 384 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 TMEM26Q6ZUK4 368 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 PRUNE1Q86TP1 453 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 SERPINA9Q86WD7 417 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 NUDT22Q9BRQ3 303 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 FOXP3Q9BZS1 431 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 RDH14Q9HBH5 336 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 EPB41L5Q9HCM4 733 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 TRMT1Q9NXH9 659 aaKnown RBP20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 SCHIP1Q9P0W5 487 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 TCAF1Q9Y4C2 921 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 ADAMTS20P59510 1910 aa20.5■□□□□ 0.87
TRAPPC9-215ENST00000524162 IGHV5-10-1A0A0J9YXX1 117 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 GOLGA6L10A0A0M3HER8 536 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 TLX3O43711 291 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 THRAP10827 490 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 COILP38432 576 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 NSG1P42857 185 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 BASP1P80723 227 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 SARNPP82979 210 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 CFHR1Q03591 330 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 USP53Q70EK8 1073 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 TRIM48Q8IWZ4 208 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 FBXO39Q8N4B4 442 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZNF248Q8NDW4 579 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 COG1Q8WTW3 980 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.49■□□□□ 0.875e-7■■■■■ 72.6
TRAPPC9-215ENST00000524162 CCDC97Q96F63 343 aaPredicted RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 AHCYL2Q96HN2 611 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 MS4A14Q96JA4 679 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 TTC1Q99614 292 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCM2Q9BSQ5 444 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 SEMA6CQ9H3T2 930 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 MRM3Q9HC36 420 aaKnown RBP20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 KCND1Q9NSA2 647 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 BFARQ9NZS9 450 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 NEU2Q9Y3R4 380 aa20.49■□□□□ 0.87
TRAPPC9-215ENST00000524162 TRBV23OR9-2A0A075B6M9 112 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 NVLO15381 856 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 RRP8O43159 456 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 PHF2O75151 1096 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 RPL10P27635 214 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 FOXN2P32314 431 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 CSF2RBP32927 897 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 ARSDP51689 593 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 RPA4Q13156 261 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 GSE1Q14687 1217 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 ZRANB3Q5FWF4 1079 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 PAPD7Q5XG87 772 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 TTC27Q6P3X3 843 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 LRRC8BQ6P9F7 803 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 CCDC137Q6PK04 289 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 AFTPHQ6ULP2 937 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 PIANPQ8IYJ0 282 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 PPHLN1Q8NEY8 458 aaKnown RBP20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 HM13Q8TCT9 377 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 GRK7Q8WTQ7 553 aa20.48■□□□□ 0.87
TRAPPC9-215ENST00000524162 RAB33BQ9H082 229 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms