RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 NT5DC3Q86UY8 548 aa22.24■■□□□ 1.15
PVT1-218ENST00000523328 D2HGDHQ8N465 521 aa22.24■■□□□ 1.15
PVT1-218ENST00000523328 PLD5Q8N7P1 536 aa22.24■■□□□ 1.15
PVT1-218ENST00000523328 Q8NA96 180 aa22.24■■□□□ 1.15
PVT1-218ENST00000523328 SPO11Q9Y5K1 396 aa22.24■■□□□ 1.15
PVT1-218ENST00000523328 SEC16AO15027 2179 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 TLCD2A6NGC4 264 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 RPE65Q16518 533 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 EIF2S3LQ2VIR3 472 aaKnown RBP22.23■■□□□ 1.15
PVT1-218ENST00000523328 IZUMO3Q5VZ72 239 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 JMJD6Q6NYC1 403 aaPredicted RBP22.23■■□□□ 1.15
PVT1-218ENST00000523328 KLHL35Q6PF15 583 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 SLC38A9Q8NBW4 561 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 ZNF830Q96NB3 372 aaPredicted RBP22.23■■□□□ 1.15
PVT1-218ENST00000523328 RNF157Q96PX1 679 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 CD180Q99467 661 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 BPIFA1Q9NP55 256 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 ZNF451Q9Y4E5 1061 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 PCDHGB7Q9Y5F8 929 aa22.23■■□□□ 1.15
PVT1-218ENST00000523328 KCNJ13O60928 360 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 SCRG1O75711 98 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 PROSCO94903 275 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 TUBB4BP68371 445 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 HSD11B2P80365 405 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 PDE1BQ01064 536 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 MRPL49Q13405 166 aaKnown RBP22.22■■□□□ 1.15
PVT1-218ENST00000523328 TUBB2AQ13885 445 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 GTF2H3Q13889 308 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 SLC14A2Q15849 920 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 ANO6Q4KMQ2 910 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 FAM83HQ6ZRV2 1179 aaPredicted RBP22.22■■□□□ 1.15
PVT1-218ENST00000523328 RAPGEF5Q92565 580 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 SYN2Q92777 582 aaPredicted RBP22.22■■□□□ 1.15
PVT1-218ENST00000523328 MR1Q95460 341 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 AGAP3Q96P47 875 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 BPIFA3Q9BQP9 254 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 TUBB2BQ9BVA1 445 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 XPO4Q9C0E2 1151 aaKnown RBP22.22■■□□□ 1.15
PVT1-218ENST00000523328 SLC25A51Q9H1U9 297 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 CASS4Q9NQ75 786 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 LUZP4Q9P127 313 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 PSMD13Q9UNM6 376 aa22.22■■□□□ 1.15
PVT1-218ENST00000523328 CRYBG3Q68DQ2 2970 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 OR5K3A6NET4 321 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 NDST3O95803 873 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 DDAH2O95865 285 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 MT-CYBP00156 380 aaPredicted RBP22.21■■□□□ 1.15
PVT1-218ENST00000523328 KDELR1P24390 212 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 ARL4DP49703 201 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 CTSCP53634 463 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 NR1I3Q14994 352 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 PLCL1Q15111 1095 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 GPR19Q15760 415 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 DNTTIP2Q5QJE6 756 aaKnown RBP22.21■■□□□ 1.15
PVT1-218ENST00000523328 ALKBH5Q6P6C2 394 aaKnown RBP22.21■■□□□ 1.15
PVT1-218ENST00000523328 AMZ2Q86W34 360 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 TMEM126BQ8IUX1 230 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 SPATA22Q8NHS9 363 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 GDAP1Q8TB36 358 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 BRSK1Q8TDC3 778 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 ZNF501Q96CX3 271 aaPredicted RBP22.21■■□□□ 1.15
PVT1-218ENST00000523328 NAT10Q9H0A0 1025 aaKnown RBP22.21■■□□□ 1.15
PVT1-218ENST00000523328 CHST8Q9H2A9 424 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 CBX8Q9HC52 389 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 KCND1Q9NSA2 647 aa22.21■■□□□ 1.15
PVT1-218ENST00000523328 CELSR2Q9HCU4 2923 aa22.2■■□□□ 1.15
PVT1-218ENST00000523328 UBA6A0AVT1 1052 aaPredicted RBP22.2■■□□□ 1.14
PVT1-218ENST00000523328 DPM1O60762 260 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 POP7O75817 140 aaKnown RBP22.2■■□□□ 1.14
PVT1-218ENST00000523328 SERPING1P05155 500 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 HMGCLP35914 325 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 AP1B1Q10567 949 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 LCN10Q6JVE6 187 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 RASGEF1AQ8N9B8 481 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 FDCSPQ8NFU4 85 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 TTC25Q96NG3 672 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 LRFN5Q96NI6 719 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 SRPK1Q96SB4 655 aaKnown RBP22.2■■□□□ 1.14
PVT1-218ENST00000523328 NUDT9Q9BW91 350 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 IL26Q9NPH9 171 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 HEY1Q9Y5J3 304 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 PCSK5Q92824 1860 aa22.2■■□□□ 1.14
PVT1-218ENST00000523328 SSU72P8A0A1W2PR75 194 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 CA5AP35218 305 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 NFE2L1Q14494 772 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 PLEKHS1Q5SXH7 462 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 SLC6A19Q695T7 634 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 SLC9A4Q6AI14 798 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 ZNF787Q6DD87 383 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 RBMXL3Q8N7X1 1067 aaKnown RBP22.19■■□□□ 1.14
PVT1-218ENST00000523328 OR8K5Q8NH50 307 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 DTX3LQ8TDB6 740 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 OLFM3Q96PB7 478 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 MFRPQ9BY79 579 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 SLAMF7Q9NQ25 335 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 LATS2Q9NRM7 1088 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 HRASLS2Q9NWW9 162 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 NENFQ9UMX5 172 aa22.19■■□□□ 1.14
PVT1-218ENST00000523328 PIKFYVEQ9Y2I7 2098 aa22.18■■□□□ 1.14
PVT1-218ENST00000523328 A0A1W2PQJ5 194 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms