RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TUBB3Q13509 450 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 DNASE1L3Q13609 305 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 PLCL1Q15111 1095 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 PRKD1Q15139 912 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 PPP2R5EQ16537 467 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 FBXO38Q6PIJ6 1188 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 TMEM220Q6QAJ8 160 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 KDELC1Q6UW63 502 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 MICALCLQ6ZW33 695 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 PRSS42Q7Z5A4 293 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 SIDT2Q8NBJ9 832 aaKnown RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 IPMKQ8NFU5 416 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 TFB1MQ8WVM0 346 aaKnown RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 OXNAD1Q96HP4 312 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 TEKT5Q96M29 485 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 VPS35Q96QK1 796 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 DNAJC7Q99615 494 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 MAP3K3Q99759 626 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 IMP3Q9NV31 184 aaKnown RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 ZNHIT6Q9NWK9 470 aaKnown RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 KLHL8Q9P2G9 620 aaPredicted RBP15.12■□□□□ 0.01
MRPS28-209ENST00000522987 ANKMY1Q9P2S6 941 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 FAM153AQ9UHL3 310 aa15.12■□□□□ 0.01
MRPS28-209ENST00000522987 CCNYL3P0C7X3 344 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 FGF5P12034 268 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 VCLP18206 1134 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 SPAM1P38567 509 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 CDKN2BP42772 138 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 UBAP2LQ14157 1087 aaKnown RBP15.11■□□□□ 0.01
MRPS28-209ENST00000522987 MAP7Q14244 749 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 RPE65Q16518 533 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 PWWP2BQ6NUJ5 590 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 GLT6D1Q7Z4J2 308 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 AMZ2Q86W34 360 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 PPP1R3BQ86XI6 285 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 RHOT1Q8IXI2 618 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 KLHL6Q8WZ60 621 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 ZDHHC12Q96GR4 267 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 PPM1MQ96MI6 270 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 NHEJ1Q9H9Q4 299 aaPredicted RBP15.11■□□□□ 0.01
MRPS28-209ENST00000522987 ABHD10Q9NUJ1 306 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 LCMT1Q9UIC8 334 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 TFR2Q9UP52 801 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 POLHQ9Y253 713 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 KCTD3Q9Y597 815 aa15.11■□□□□ 0.01
MRPS28-209ENST00000522987 GLYATL1P3A0A0U1RQE8 302 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 SSU72P8A0A1W2PR75 194 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 ZNF487B1APH4 448 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 MKRN2OSH3BPM6 223 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 PDGFAP04085 211 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 NELFEP18615 380 aaKnown RBP15.1■□□□□ 0.01
MRPS28-209ENST00000522987 FECHP22830 423 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 AKT1P31749 480 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 ARHGAP25P42331 645 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 MARCKSL1P49006 195 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 OLIG2Q13516 323 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 IL11RAQ14626 422 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 GPR19Q15760 415 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 FNBP1LQ5T0N5 605 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 GPRC6AQ5T6X5 926 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 AGAP9Q5VTM2 703 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 SPOCD1Q6ZMY3 1216 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 PID1Q7Z2X4 250 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 RHOT2Q8IXI1 618 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 ZNF567Q8N184 647 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 MRGPRX2Q96LB1 330 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 CCDC42Q96M95 316 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 APOL2Q9BQE5 337 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 TRIM55Q9BYV6 548 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 WWP1Q9H0M0 922 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 ACTL8Q9H568 366 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 LHX9Q9NQ69 397 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 DDX56Q9NY93 547 aaKnown RBP15.1■□□□□ 0.01
MRPS28-209ENST00000522987 IL17CQ9P0M4 197 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 TLK1Q9UKI8 766 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 RARRES3Q9UL19 164 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 PADI1Q9ULC6 663 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 MAN2B2Q9Y2E5 1009 aa15.1■□□□□ 0.01
MRPS28-209ENST00000522987 LOC285095A0A1B0GVY8 99 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 GAPDHSO14556 408 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 TOX3O15405 576 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 CREG1O75629 220 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 SNRNP200O75643 2136 aaKnown RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 TPM3P06753 285 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 ATXN8OSP0DMR3 200 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 HMGCLP35914 325 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 TNNT3P45378 269 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 ARL4DP49703 201 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 KLRB1Q12918 225 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 XRCC4Q13426 336 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 SLC14A2Q15849 920 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 DNTTIP2Q5QJE6 756 aaKnown RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 CPZQ66K79 652 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 WASH2PQ6VEQ5 465 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 ASB18Q6ZVZ8 466 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 CCDC50Q8IVM0 306 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 TEX19Q8NA77 164 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
MRPS28-209ENST00000522987 FICDQ9BVA6 458 aa15.09■□□□□ 0.01
MRPS28-209ENST00000522987 PDE7BQ9NP56 450 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms