RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 LILRA3Q8N6C8 439 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 OR56A4Q8NGH8 313 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 OR1E3Q8WZA6 343 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TSACCQ96A04 125 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 TSPAN17Q96FV3 270 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 KLHDC7BQ96G42 594 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 FAM126AQ9BYI3 521 aaPredicted RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 C12orf65Q9H3J6 166 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 GPAMQ9HCL2 828 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 SLC23A2Q9UGH3 650 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 TRMT6Q9UJA5 497 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 TLK1Q9UKI8 766 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 SLC17A4Q9Y2C5 497 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 DHRS7Q9Y394 339 aa13.18□□□□□ -0.3
CLK4-210ENST00000522136 ATXN2Q99700 1313 aaKnown RBP13.18□□□□□ -0.3
CLK4-210ENST00000522136 A0A1W2PR77 199 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 HMGB1P1B2RPK0 211 aaPredicted RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 GRID2O43424 1007 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 WISP3O95389 354 aaPredicted RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 CRABP2P29373 138 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 CCNFP41002 786 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 SLC18A2Q05940 514 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 ILF2Q12905 390 aaKnown RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 DLG1Q12959 904 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 GPS2Q13227 327 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 ZNF528Q3MIS6 628 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 BCL7AQ4VC05 210 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 CEP68Q76N32 757 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 C11orf96Q7Z7L8 435 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 CPNE9Q8IYJ1 553 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 ELMO1Q92556 727 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 PDXPQ96GD0 296 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 WDR92Q96MX6 357 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 PANX3Q96QZ0 392 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 SMC6Q96SB8 1091 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 CCM2Q9BSQ5 444 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 CYP4F12Q9HCS2 524 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 MED4Q9NPJ6 270 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 SPATS2LQ9NUQ6 558 aaKnown RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 GULP1Q9UBP9 304 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 SUFUQ9UMX1 484 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 PLEKHM1Q9Y4G2 1056 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 ZNF318Q5VUA4 2279 aa13.17□□□□□ -0.3
CLK4-210ENST00000522136 TNRC6BQ9UPQ9 1833 aaKnown RBP13.17□□□□□ -0.3
CLK4-210ENST00000522136 PRSS38A1L453 326 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 FTH1P02794 183 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 MPOP05164 745 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CCDC166P0CW27 439 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 BRAFP15056 766 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ZNF37AP17032 561 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 AOAHP28039 575 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 HTR1BP28222 390 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CD38P28907 300 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 HPDP32754 393 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 CSNK1EP49674 416 aaKnown RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 RACK1P63244 317 aaKnown RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 BOP1Q14137 746 aaKnown RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 TCEA2Q15560 299 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ZNF542PQ5EBM4 170 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ACSBG2Q5FVE4 666 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 LYSMD4Q5XG99 296 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CDHR3Q6ZTQ4 885 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 OTOAQ7RTW8 1153 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 LRRTM4Q86VH4 590 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 BANPQ8N9N5 519 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 MFSD2AQ8NA29 543 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ZBTB44Q8NCP5 570 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ACMSDQ8TDX5 336 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 NXNL1Q96CM4 212 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ACOT9Q9Y305 439 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ANKRD12Q6UB98 2062 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 LRP4O75096 1905 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 QSOX1O00391 747 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 GALR2O43603 387 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 CD9P21926 228 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 SKIV2L2P42285 1042 aaKnown RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 GNPDA1P46926 289 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 HSPA14Q0VDF9 509 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 MPP2Q14168 576 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 FZD2Q14332 565 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CSHL1Q14406 222 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 TAF1BQ53T94 588 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 WDR45BQ5MNZ6 344 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 UGT3A1Q6NUS8 523 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 CHST15Q7LFX5 561 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 VRK3Q8IV63 474 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 ZBTB2Q8N680 514 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 INPP5DQ92835 1189 aa13.16□□□□□ -0.3
CLK4-210ENST00000522136 SCARF2Q96GP6 870 aaPredicted RBP13.16□□□□□ -0.3
CLK4-210ENST00000522136 ZNF514Q96K75 400 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms