RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 CMASQ8NFW8 434 aaPredicted RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 POF1BQ8WVV4 589 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 NUDT4Q9NZJ9 180 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 GPN3Q9UHW5 284 aaPredicted RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 GNEQ9Y223 722 aaKnown RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 TRAF6Q9Y4K3 522 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 GALTP07902 379 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 HNRNPLP14866 589 aaKnown RBP eCLIP16.03■□□□□ 0.16
USP42-207ENST00000521713 PCSK2P16519 638 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 TGFBR2P37173 567 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 FEN1P39748 380 aaKnown RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 VEGFBP49765 207 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 BCAP31P51572 246 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 LIMK2P53671 638 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 MLLT6P55198 1093 aaPredicted RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 CDH13P55290 713 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 PDE12Q6L8Q7 609 aaKnown RBP16.03■□□□□ 0.16
USP42-207ENST00000521713 SERPINA9Q86WD7 417 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 C10orf107Q8IVU9 208 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 RHOBTB2Q9BYZ6 727 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 DNAJC28Q9NX36 388 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 CACNG4Q9UBN1 327 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 VPS4AQ9UN37 437 aa16.03■□□□□ 0.16
USP42-207ENST00000521713 CLDN25C9JDP6 229 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 AGPSO00116 658 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 ZNF865P0CJ78 1059 aaPredicted RBP16.02■□□□□ 0.16
USP42-207ENST00000521713 UMPSP11172 480 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 ALG11Q2TAA5 492 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 TRIM40Q6P9F5 258 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 AHI1Q8N157 1196 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 TSTD1Q8NFU3 115 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 PRICKLE1Q96MT3 831 aaPredicted RBP16.02■□□□□ 0.16
USP42-207ENST00000521713 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 NPEPPSL1A6NEC2 478 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 SLC31A1O15431 190 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 PIAS1O75925 651 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 ALPPL2P10696 532 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 TSPAN8P19075 237 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 GSTM5P46439 218 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 SPESP1Q6UW49 350 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 CFAP206Q8IYR0 622 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 RBM15BQ8NDT2 890 aaKnown RBP16.02■□□□□ 0.16
USP42-207ENST00000521713 OVCA2Q8WZ82 227 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 CLIP3Q96DZ5 547 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 MFSD3Q96ES6 412 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 MIOSQ9NXC5 875 aa16.02■□□□□ 0.16
USP42-207ENST00000521713 CAPN8A6NHC0 703 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 A8MUI8 341 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 PIRO00625 290 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 INPPL1O15357 1258 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 LAPTM5Q13571 262 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 LPCAT4Q643R3 524 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 SUV39H2Q9H5I1 410 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 CDH22Q9UJ99 828 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 IKZF3Q9UKT9 509 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 COQ6Q9Y2Z9 468 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 NR2F1P10589 423 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 NRIP1P48552 1158 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 RPIAP49247 311 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 ATXN1P54253 815 aaKnown RBP16.02■□□□□ 0.15
USP42-207ENST00000521713 ATP12AP54707 1039 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 PLA2G4EQ3MJ16 856 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.15
USP42-207ENST00000521713 PRR23BQ6ZRT6 265 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 EIF3MQ7L2H7 374 aaKnown RBP16.02■□□□□ 0.15
USP42-207ENST00000521713 CUZD1Q86UP6 607 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 OSTM1Q86WC4 334 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 TDRPQ86YL5 185 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 RAB43Q86YS6 212 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 FBXO30Q8TB52 745 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 PPCDCQ96CD2 204 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 AARSD1Q9BTE6 412 aaKnown RBP16.02■□□□□ 0.15
USP42-207ENST00000521713 EBF2Q9HAK2 575 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 C3orf14Q9HBI5 128 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 SGK2Q9HBY8 427 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 ATP6V1HQ9UI12 483 aa16.02■□□□□ 0.15
USP42-207ENST00000521713 DOT1LQ8TEK3 1739 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 RBM47A0AV96 593 aaKnown RBP16.01■□□□□ 0.15
USP42-207ENST00000521713 GNSP15586 552 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 SMIM11AP58511 58 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 BIKQ13323 160 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 CA9Q16790 459 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 ATXN7L2Q5T6C5 722 aaPredicted RBP16.01■□□□□ 0.15
USP42-207ENST00000521713 SCIMPQ6UWF3 145 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 ISLR2Q6UXK2 745 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 SCAIQ8N9R8 606 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PIGVQ9NUD9 493 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 POLR1DQ9Y2S0 133 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 GPC6Q9Y625 555 aaPredicted RBP16.01■□□□□ 0.15
USP42-207ENST00000521713 CRYBG1Q9Y4K1 1723 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 OR2AG2A6NM03 316 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PLK4O00444 970 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 ITGAXP20702 1163 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 CMPK1P30085 196 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 GPR33Q49SQ1 333 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 PARGQ86W56 976 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 IRF7Q92985 503 aa16.01■□□□□ 0.15
USP42-207ENST00000521713 RAD51AP1Q96B01 352 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms