RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 ZNF662Q6ZS27 426 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 BEND7Q8N7W2 519 aaPredicted RBP21.15■□□□□ 0.98
HOXA3-204ENST00000521401 UBE2Q2Q8WVN8 375 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 SGF29Q96ES7 293 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 CCNL2Q96S94 520 aaPredicted RBP21.15■□□□□ 0.98
HOXA3-204ENST00000521401 ZMYND15Q9H091 742 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 SLC40A1Q9NP59 571 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 B3GALT1Q9Y5Z6 326 aa21.15■□□□□ 0.98
HOXA3-204ENST00000521401 MN1Q10571 1320 aaPredicted RBP21.14■□□□□ 0.97
HOXA3-204ENST00000521401 EFCAB7A8K855 629 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 CCL22O00626 93 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 LIASO43766 372 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 AP2A1O95782 977 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 C9P02748 559 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 TPH1P17752 444 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 GFERP55789 205 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 PDE1BQ01064 536 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 NFE2L1Q14494 772 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 LONRF2Q1L5Z9 754 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 P3H1Q32P28 736 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 FNBP1LQ5T0N5 605 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 SEL1L2Q5TEA6 688 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 TMEM164Q5U3C3 297 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 DET1Q7L5Y6 550 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 TRIM48Q8IWZ4 208 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 ART4Q93070 314 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 DNAJC1Q96KC8 554 aaKnown RBP21.14■□□□□ 0.97
HOXA3-204ENST00000521401 DDA1Q9BW61 102 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 LRRC40Q9H9A6 602 aa21.14■□□□□ 0.97
HOXA3-204ENST00000521401 UBXN7O94888 489 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 TYRP1P17643 537 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 AKT1P31749 480 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 BCL7AQ4VC05 210 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 METRNLQ641Q3 311 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 CCDC81Q6ZN84 652 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 LRRC8AQ8IWT6 810 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 TAB3Q8N5C8 712 aaPredicted RBP21.13■□□□□ 0.97
HOXA3-204ENST00000521401 CCDC112Q8NEF3 446 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 ZNF514Q96K75 400 aaPredicted RBP21.13■□□□□ 0.97
HOXA3-204ENST00000521401 LINC00615Q96LM1 132 aaPredicted RBP21.13■□□□□ 0.97
HOXA3-204ENST00000521401 FRMD8P1Q9BZ68 369 aaPredicted RBP21.13■□□□□ 0.97
HOXA3-204ENST00000521401 FAM96AQ9H5X1 160 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 SLC39A1Q9NY26 324 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 KLHL3Q9UH77 587 aa21.13■□□□□ 0.97
HOXA3-204ENST00000521401 H7C0S8 307 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 STIP1P31948 543 aaKnown RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 HADHAP40939 763 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 CDKN1CP49918 316 aaPredicted RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 MC2RQ01718 297 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 GPR18Q14330 331 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 RPS6KA1Q15418 735 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 SIX1Q15475 284 aaPredicted RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 RPE65Q16518 533 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 SNX20Q7Z614 316 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 FAM129CQ86XR2 697 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 PLXDC1Q8IUK5 500 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 RBM12BQ8IXT5 1001 aaKnown RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 LSM14AQ8ND56 463 aaKnown RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 GPR150Q8NGU9 434 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 C1orf54Q8WWF1 131 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 TTC9Q92623 222 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 RSC1A1Q92681 617 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 LRRC45Q96CN5 670 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 CXorf40BQ96DE9 158 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 C9orf72Q96LT7 481 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 PIH1D1Q9NWS0 290 aaKnown RBP21.12■□□□□ 0.97
HOXA3-204ENST00000521401 CRLS1Q9UJA2 301 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 PSMD13Q9UNM6 376 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 IGSF10Q6WRI0 2623 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 AHCTF1Q8WYP5 2266 aa21.12■□□□□ 0.97
HOXA3-204ENST00000521401 MGAT4DA6NG13 374 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 PSMD3O43242 534 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 ANKRD34CP0C6C1 535 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 WT1P19544 449 aaPredicted RBP21.11■□□□□ 0.97
HOXA3-204ENST00000521401 PSMA3P25788 255 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 PBLDP30039 288 aaPredicted RBP21.11■□□□□ 0.97
HOXA3-204ENST00000521401 MC4RP32245 332 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 HALP42357 657 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 CCZ1BP86790 482 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 CCZ1P86791 482 aaPredicted RBP21.11■□□□□ 0.97
HOXA3-204ENST00000521401 RHDQ02161 417 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 ANKS6Q68DC2 871 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 PRUNE1Q86TP1 453 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 NXPE1Q8N323 547 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 OR2L2Q8NH16 312 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 SLC39A7Q92504 469 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 ULK4Q96C45 1275 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 SPRY4Q9C004 299 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 ETNK1Q9HBU6 452 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 NLE1Q9NVX2 485 aaPredicted RBP21.11■□□□□ 0.97
HOXA3-204ENST00000521401 MGAQ8IWI9 3026 aa21.11■□□□□ 0.97
HOXA3-204ENST00000521401 TRBV5-4A0A0C4DH59 114 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 STMND1H3BQB6 276 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 ERVH48-1M5A8F1 160 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 TK2O00142 265 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 PRSS56P0CW18 603 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 AMD1P17707 334 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 ITGALP20701 1170 aa21.1■□□□□ 0.97
HOXA3-204ENST00000521401 LEPRP48357 1165 aaKnown RBP21.1■□□□□ 0.97
HOXA3-204ENST00000521401 RAB15P59190 212 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms