RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 SLC36A4Q6YBV0 504 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF517Q6ZMY9 492 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 Q6ZTK2 550 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MEPCEQ7L2J0 689 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SPATA19Q7Z5L4 167 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ABI3BPQ7Z7G0 1075 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 CCDC190Q86UF4 302 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 PM20D2Q8IYS1 436 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 CCAR2Q8N163 923 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 FBXO39Q8N4B4 442 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 CARNMT1Q8N4J0 409 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 RBMXL3Q8N7X1 1067 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 NRACQ8N912 160 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MIGA1Q8NAN2 632 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MCUQ8NE86 351 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 GDAP1Q8TB36 358 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 LPAR1Q92633 364 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SECISBP2LQ93073 1101 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 MS4A10Q96PG2 267 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 RAB3IPQ96QF0 476 aaPredicted RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 FNBP1Q96RU3 617 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 SLC25A33Q9BSK2 321 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRNAU1APQ9NX07 287 aaKnown RBP3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 ANAPC5Q9UJX4 755 aa3.36□□□□□ -1.87
HMGN1P28-201ENST00000521340 IGLV5-52A0A0A0MRZ9 124 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 A4D1N5 150 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 FAM90A10PA6NDY2 464 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ANXA2P2A6NMY6 339 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PLK4O00444 970 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 VWA5AO00534 786 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 TNFRSF13BO14836 293 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 CLGNO14967 610 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MID1O15344 667 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRAMEF11O60813 436 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MED24O75448 989 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PENKP01210 267 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 CYP1A2P05177 515 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 IGHV4-30-4P0DP06 118 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 SRCP12931 536 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 FDPSP14324 419 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF12P17014 697 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ERCC2P18074 760 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 S1PR1P21453 382 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MPZP25189 248 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ITGB8P26012 769 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 CORO1AP31146 461 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ARRB2P32121 409 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ADARP55265 1226 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 POLR2LP62875 67 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 FOXM1Q08050 763 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 NFATC4Q14934 902 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 TWIST1Q15672 202 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 DNTTIP2Q5QJE6 756 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ALS2CLQ60I27 953 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 SLC27A1Q6PCB7 646 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 C11orf88Q6PI97 169 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRAPPC11Q7Z392 1133 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 DSG4Q86SJ6 1040 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 C1orf87Q8N0U7 546 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PELI3Q8N2H9 469 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 EMC1Q8N766 993 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF114Q8NC26 417 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PAPD5Q8NDF8 572 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 OR2AJ1Q8NGZ0 328 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRSS3P2Q8NHM4 247 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 THAP6Q8TBB0 222 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 EXT2Q93063 718 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ABTB1Q969K4 478 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ATP6V1E2Q96A05 226 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MOAP1Q96BY2 351 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 NXNL1Q96CM4 212 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PRMT6Q96LA8 375 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 FEVQ99581 238 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 CMKLR1Q99788 373 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MLPHQ9BV36 600 aaPredicted RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 THUMPD3Q9BV44 507 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 IL25Q9H293 177 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MYNNQ9NPC7 610 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PTGDR2Q9Y5Y4 395 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 PDS5AQ29RF7 1337 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 RPGRIP1LQ68CZ1 1315 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 ATXN2Q99700 1313 aaKnown RBP3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 CACNA1IQ9P0X4 2223 aa3.35□□□□□ -1.87
HMGN1P28-201ENST00000521340 MYO15BQ96JP2 1530 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 TRAV34A0A0B4J273 112 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 TEX13DA0A0J9YY54 714 aaPredicted RBP3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 A0A1W2PPK0 400 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CTAGE9A4FU28 777 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 C5orf52A6NGY3 159 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 ZNF587BE7ETH6 402 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 H0YIN7 160 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 DVL1O14640 695 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 SSX4O60224 188 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 LDB3O75112 727 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 RFPL2O75678 378 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GAGE7O76087 117 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 CH25HO95992 272 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 GBAP04062 536 aa3.34□□□□□ -1.87
HMGN1P28-201ENST00000521340 FAM58BPP0C7Q3 252 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms