RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IYDQ6PHW0 289 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 SPSB3Q6PJ21 355 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 TAOK1Q7L7X3 1001 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 PIWIL3Q7Z3Z3 882 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 CNPY4Q8N129 248 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CLEC18CQ8NCF0 446 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 LMO3Q8TAP4 145 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 MAGEC3Q8TD91 643 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 RSPH1Q8WYR4 309 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 TRIB2Q92519 343 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 CCDC47Q96A33 483 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 LRFN5Q96NI6 719 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 SPATC1LQ9H0A9 340 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 ST6GALNAC4Q9H4F1 302 aa4.02□□□□□ -1.77
SQLE-204ENST00000520493 DDX25Q9UHL0 483 aaKnown RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 TTC7AQ9ULT0 858 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 TMEM184BQ9Y519 407 aaPredicted RBP4.02□□□□□ -1.77
SQLE-204ENST00000520493 PLSCR5A0PG75 271 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 GOLGA6L9A6NEM1 432 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 IFITM10A6NMD0 228 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 MAGEB17A8MXT2 336 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 M0QZ24 198 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 VCYO14598 125 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 LDB3O75112 727 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 SIX3O95343 332 aaPredicted RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 HNRNPH1P31943 449 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 TMF1P82094 1093 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 POU3F1Q03052 451 aaPredicted RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 SCN1BQ07699 218 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 HNF4GQ14541 408 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 IL11RAQ14626 422 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 MORF4L2Q15014 288 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 SLC39A14Q15043 492 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PKN2Q16513 984 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 KRTCAP3Q53RY4 240 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 FAM109BQ6ICB4 259 aaPredicted RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 CAVIN1Q6NZI2 390 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 TATDN1Q6P1N9 297 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 TPRG1Q6ZUI0 275 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 CCDC170Q8IYT3 715 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 CLIP4Q8N3C7 705 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 AADATQ8N5Z0 425 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 NAT8LQ8N9F0 302 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 TC2NQ8N9U0 490 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PTP4A1Q93096 173 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PTERQ96BW5 349 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 HDAC11Q96DB2 347 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 ERO1AQ96HE7 468 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 DUX5Q96PT3 197 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 GAD1Q99259 594 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PI4K2AQ9BTU6 479 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 KCNK15Q9H427 330 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PPP1R3EQ9H7J1 279 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 CLK4Q9HAZ1 481 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 MMP25Q9NPA2 562 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 ACSS1Q9NUB1 689 aaPredicted RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 TMEM51Q9NW97 253 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 ADPRHL2Q9NX46 363 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 DBNLQ9UJU6 430 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 RCOR1Q9UKL0 485 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 ISY1Q9ULR0 285 aaKnown RBP4.01□□□□□ -1.77
SQLE-204ENST00000520493 LIPT1Q9Y234 373 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 PAM16Q9Y3D7 125 aa4.01□□□□□ -1.77
SQLE-204ENST00000520493 TRAV34A0A0B4J273 112 aa4□□□□□ -1.77
SQLE-204ENST00000520493 IGHV4-28A0A0C4DH34 117 aa4□□□□□ -1.77
SQLE-204ENST00000520493 A0A0U1RQK1 487 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ZNF320A2RRD8 509 aa4□□□□□ -1.77
SQLE-204ENST00000520493 CPED1A4D0V7 1026 aa4□□□□□ -1.77
SQLE-204ENST00000520493 TMEM8BA6NDV4 472 aa4□□□□□ -1.77
SQLE-204ENST00000520493 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SQLE-204ENST00000520493 KDM4EB2RXH2 506 aaPredicted RBP4□□□□□ -1.77
SQLE-204ENST00000520493 C19orf81C9J6K1 198 aa4□□□□□ -1.77
SQLE-204ENST00000520493 IPO8O15397 1037 aaKnown RBP4□□□□□ -1.77
SQLE-204ENST00000520493 VNN2O95498 520 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ICAM1P05362 532 aa4□□□□□ -1.77
SQLE-204ENST00000520493 THEGLP0DJG4 465 aa4□□□□□ -1.77
SQLE-204ENST00000520493 DAOP14920 347 aa4□□□□□ -1.77
SQLE-204ENST00000520493 CASTP20810 708 aaKnown RBP4□□□□□ -1.77
SQLE-204ENST00000520493 NR2F2P24468 414 aa4□□□□□ -1.77
SQLE-204ENST00000520493 RAB28P51157 221 aa4□□□□□ -1.77
SQLE-204ENST00000520493 WASHC5Q12768 1159 aa4□□□□□ -1.77
SQLE-204ENST00000520493 KIF5AQ12840 1032 aa4□□□□□ -1.77
SQLE-204ENST00000520493 MAD2L1Q13257 205 aaPredicted RBP4□□□□□ -1.77
SQLE-204ENST00000520493 DECR1Q16698 335 aa4□□□□□ -1.77
SQLE-204ENST00000520493 TYSND1Q2T9J0 566 aa4□□□□□ -1.77
SQLE-204ENST00000520493 C2orf76Q3KRA6 126 aa4□□□□□ -1.77
SQLE-204ENST00000520493 IGSF11Q5DX21 431 aa4□□□□□ -1.77
SQLE-204ENST00000520493 DCST1Q5T197 706 aa4□□□□□ -1.77
SQLE-204ENST00000520493 ARMC4Q5T2S8 1044 aa4□□□□□ -1.77
SQLE-204ENST00000520493 C9orf57Q5W0N0 161 aa4□□□□□ -1.77
SQLE-204ENST00000520493 LCN10Q6JVE6 187 aa4□□□□□ -1.77
SQLE-204ENST00000520493 SUSD1Q6UWL2 747 aa4□□□□□ -1.77
SQLE-204ENST00000520493 PRSS57Q6UWY2 283 aa4□□□□□ -1.77
SQLE-204ENST00000520493 MSANTD1Q6ZTZ1 278 aa4□□□□□ -1.77
SQLE-204ENST00000520493 SHFQ7M4L6 423 aa4□□□□□ -1.77
SQLE-204ENST00000520493 SDCCAG8Q86SQ7 713 aaPredicted RBP4□□□□□ -1.77
SQLE-204ENST00000520493 CUZD1Q86UP6 607 aa4□□□□□ -1.77
SQLE-204ENST00000520493 C10orf53Q8N6V4 93 aa4□□□□□ -1.77
SQLE-204ENST00000520493 PI4KAP1Q8N8J0 262 aa4□□□□□ -1.77
SQLE-204ENST00000520493 OR1J2Q8NGS2 313 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms