RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 DNAJC3Q13217 504 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 THOC5Q13769 683 aaKnown RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 SEMA3AQ14563 771 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 UGP2Q16851 508 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 PREPLQ4J6C6 727 aaPredicted RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 ZNF789Q5FWF6 425 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 LGSNQ5TDP6 509 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 ZNF470Q6ECI4 717 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 FSTL4Q6MZW2 842 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 BRAT1Q6PJG6 821 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 PRR23BQ6ZRT6 265 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 TPRG1Q6ZUI0 275 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 TAOK1Q7L7X3 1001 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 PTAR1Q7Z6K3 402 aaPredicted RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 GALNT7Q86SF2 657 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 LDB1Q86U70 411 aaPredicted RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 TSPAN33Q86UF1 283 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 RALGPS2Q86X27 583 aaPredicted RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 CILP2Q8IUL8 1156 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 DEFB123Q8N688 67 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 BANPQ8N9N5 519 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 ACVR1CQ8NER5 493 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 TMIEQ8NEW7 156 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 OR6P1Q8NGX9 317 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 OR4L1Q8NH43 312 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 BCAS4Q8TDM0 211 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 DENND1AQ8TEH3 1009 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 UCMAQ8WVF2 138 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 MTBPQ96DY7 904 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 VPS39Q96JC1 886 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 SRPK1Q96SB4 655 aaKnown RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 KLF6Q99612 283 aaPredicted RBP7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 C19orf43Q9BQ61 176 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 FAM167BQ9BTA0 163 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 GPR63Q9BZJ6 419 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 RHOJQ9H4E5 214 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 ZDHHC4Q9NPG8 344 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 PRSS16Q9NQE7 514 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 NSMCE4AQ9NXX6 385 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 SENP1Q9P0U3 644 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 KLHL3Q9UH77 587 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 FBXO5Q9UKT4 447 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 STON1Q9Y6Q2 735 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 EYSQ5T1H1 3165 aa7.81□□□□□ -1.16
CTHRC1-203ENST00000520337 C1orf232A0A0U1RR37 186 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 TMEM120BA0PK00 339 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 C16orf96A6NNT2 1141 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 A8MX80 341 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 GOLGA8RI6L899 631 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 STX7O15400 261 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PRPF4O43172 522 aaKnown RBP eCLIP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 NARSO43776 548 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SPAG7O75391 227 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 EGFP01133 1207 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SLC4A1P02730 911 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PRSS56P0CW18 603 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CHN1P15882 459 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 LHCGRP22888 699 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 FOXN2P32314 431 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SPRP35270 261 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 LEPRP48357 1165 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 NEK3P51956 506 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 GTF2A1P52655 376 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 POLR2LP62875 67 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PRAMEP78395 509 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PDE1BQ01064 536 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 EGR3Q06889 387 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 RALGDSQ12967 914 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PEX6Q13608 980 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 ELAVL3Q14576 367 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 C2orf27AQ580R0 203 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 TMEM196Q5HYL7 178 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 LRRC73Q5JTD7 316 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 LRRC66Q68CR7 880 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CNSTQ6PJW8 725 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SERPINA13PQ6UXR4 307 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 RFLNAQ6ZTI6 216 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 KIAA0408Q6ZU52 694 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 LMNTD2Q8IXW0 634 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PIANPQ8IYJ0 282 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 NDUFAF2Q8N183 169 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 C4orf33Q8N1A6 199 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CBARPQ8N350 705 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 DCLK2Q8N568 766 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 FBXO15Q8NCQ5 510 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CALML6Q8TD86 181 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 OR8D1Q8WZ84 308 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 DNASE1L2Q92874 299 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 ARRDC3Q96B67 414 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SMC6Q96SB8 1091 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 GPR22Q99680 433 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 SELENOSQ9BQE4 189 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 EPN3Q9H201 632 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 C8orf33Q9H7E9 229 aaPredicted RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 CNOT10Q9H9A5 744 aaKnown RBP7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 BPIFA1Q9NP55 256 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 PCDH12Q9NPG4 1184 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 HEBP1Q9NRV9 189 aa7.8□□□□□ -1.16
CTHRC1-203ENST00000520337 TXNDC16Q9P2K2 825 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms