RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 EIF4E1BA6NMX2 242 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 HNRNPCL2B2RXH8 293 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAP2K7O14733 419 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLGNO14967 610 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SMAD9O15198 467 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 OGG1O15527 345 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 DDNO94850 711 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 RB1P06400 928 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SNRNP70P08621 437 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 GABRB1P18505 474 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 UGT1A1P22309 533 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ACADLP28330 430 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 APOBEC1P41238 236 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 GAS1P54826 345 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 EEF1A1P68104 462 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 IRX3P78415 501 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CBX1P83916 185 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SREBF2Q12772 1141 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 IKQ13123 557 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 PRKG2Q13237 762 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ASTE1Q2TB18 679 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ALDH1L2Q3SY69 923 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 DUSP28Q4G0W2 176 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 RARS2Q5T160 578 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 EEF1A1P5Q5VTE0 462 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FAM205BPQ63HN1 556 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 C18orf63Q68DL7 685 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 LCN10Q6JVE6 187 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 UNQ6126/PRO20091Q6UXV3 157 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CFAP77Q6ZQR2 320 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FASTKD5Q7L8L6 764 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 NRROSQ86YC3 692 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CREBRFQ8IUR6 639 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 MCEMP1Q8IX19 187 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF34Q8IZ26 560 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 OR2AK2Q8NG84 335 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SPATA22Q8NHS9 363 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 LMO3Q8TAP4 145 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 PIBF1Q8WXW3 757 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ANP32BQ92688 251 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ABTB1Q969K4 478 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 NSUN4Q96CB9 384 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FAM120BQ96EK7 910 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CDCA5Q96FF9 252 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 EGLN2Q96KS0 407 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 IL17FQ96PD4 163 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CMKLR1Q99788 373 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 MAK16Q9BXY0 300 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CFAP74Q9C0B2 1584 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 PLK3Q9H4B4 646 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 EBF2Q9HAK2 575 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 SETD4Q9NVD3 440 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 HAUS2Q9NVX0 235 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 TERF2IPQ9NYB0 399 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 WWOXQ9NZC7 414 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 REREQ9P2R6 1566 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 MALT1Q9UDY8 824 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FBXL17Q9UF56 701 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FBXO2Q9UK22 296 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 VPS28Q9UK41 221 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 FBXL2Q9UKC9 423 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 PADI1Q9ULC6 663 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 NENFQ9UMX5 172 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 CMAHPQ9Y471 501 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 KDM5AP29375 1690 aaKnown RBP3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 ABCC11Q96J66 1382 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 KIDINS220Q9ULH0 1771 aa3.23□□□□□ -1.89
HMGB1P41-201ENST00000520234 IQSEC2Q5JU85 1478 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PTPRCP08575 1304 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PDS5AQ29RF7 1337 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 IFT172Q9UG01 1749 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 FRMPD1Q5SYB0 1578 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 NSD3Q9BZ95 1437 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 A0A0G2JPF8 293 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 A0A1B0GUV1 79 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 AGAP14A8MT82 685 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 SMTNL1A8MU46 457 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 HNRNPCL3B7ZW38 293 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 FAM90A26D6RGX4 464 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF587BE7ETH6 402 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ANKRD28O15084 1053 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 IPO8O15397 1037 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 TMCC2O75069 709 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CAMTA2O94983 1202 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 BAG4O95429 457 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ICAM1P05362 532 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CLTBP09497 229 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 ZNF853P0CG23 659 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 HNRNPCL4P0DMR1 293 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 MSNP26038 577 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 PON1P27169 355 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 GNL1P36915 607 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 IL15P40933 162 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 HADHAP40939 763 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 GARSP41250 739 aaKnown RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 TNNT2P45379 298 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 GPR143P51810 404 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 BRWD1-AS2P59051 145 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 MC1RQ01726 317 aa3.22□□□□□ -1.89
HMGB1P41-201ENST00000520234 CREB5Q02930 508 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms