RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 VIPP01282 170 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 JCHAINP01591 159 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GPR89BP0CG08 455 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CD99P14209 185 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PFKFB1P16118 471 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 EPB42P16452 691 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TFE3P19532 575 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 VIPR1P32241 457 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 HTR7P34969 479 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ADRA1BP35368 520 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PPP1R2P41236 205 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SYKP43405 635 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GPR1P46091 355 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SEPHS1P49903 392 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 RENBPP51606 427 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CLCNKAP51800 687 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 AIF1P55008 147 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SOX8P57073 446 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 BPIFB4P59827 614 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 UBE2IP63279 158 aaKnown RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TUBB4BP68371 445 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PAK1Q13153 545 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 STIM1Q13586 685 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TUBB2AQ13885 445 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CYTH1Q15438 398 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CNGA3Q16281 694 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ASIC2Q16515 512 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CCDC40Q4G0X9 1142 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PTPN20Q4JDL3 420 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 MIIPQ5JXC2 388 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PWWP2BQ6NUJ5 590 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 KLHL35Q6PF15 583 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 DOK6Q6PKX4 331 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 LEKR1Q6ZMV7 388 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TMEM26Q6ZUK4 368 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF765Q7L2R6 523 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 STRADAQ7RTN6 431 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PCGF5Q86SE9 256 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SRLQ86TD4 932 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ZSWIM9Q86XI8 627 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TMEM126BQ8IUX1 230 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ARHGEF19Q8IW93 802 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 NDUFAF2Q8N183 169 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CARFQ8N187 725 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 UMODL1-AS1Q8N2C9 162 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PELI3Q8N2H9 469 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 GALNT16Q8N428 558 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 WDTC1Q8N5D0 677 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 BCORP1Q8N888 145 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ENDOVQ8N8Q3 282 aaKnown RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TMEM35BQ8NCS4 154 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ANKRD20A12PQ8NF67 263 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 EXD1Q8NHP7 514 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 FAR1Q8WVX9 515 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CPT1BQ92523 772 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 MR1Q95460 341 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 NTAN1Q96AB6 310 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 C18orf8Q96DM3 657 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 COX14Q96I36 57 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ELMO2Q96JJ3 720 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ZNF514Q96K75 400 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 MEGF10Q96KG7 1140 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CD180Q99467 661 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 WDR77Q9BQA1 342 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TUBB2BQ9BVA1 445 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 CINPQ9BW66 212 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 TBC1D10AQ9BXI6 508 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 FANCEQ9HB96 536 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 MCCC2Q9HCC0 563 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SYTL2Q9HCH5 934 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 UBE2TQ9NPD8 197 aaPredicted RBP4.8□□□□□ -1.64
SDCBP-207ENST00000520168 POT1Q9NUX5 634 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 PCMTD2Q9NV79 361 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 SEMA5BQ9P283 1151 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 B4GALT6Q9UBX8 382 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 DCTN4Q9UJW0 460 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 DNPEPQ9ULA0 475 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 NEU3Q9UQ49 428 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 ANKRD12Q6UB98 2062 aa4.8□□□□□ -1.64
SDCBP-207ENST00000520168 NSD1Q96L73 2696 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-207ENST00000520168 TRBV23OR9-2A0A075B6M9 112 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 A0A1B0GVL5 298 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 TLDC2A0PJX2 215 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 SYCE3A1L190 88 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 ARHGAP42A6NI28 874 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 TMEM200CA6NKL6 621 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 C9J4A7 227 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 F5H423 210 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-207ENST00000520168 TGFBR3LH3BV60 316 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 PEX12O00623 359 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 HTRA2O43464 458 aaPredicted RBP4.79□□□□□ -1.64
SDCBP-207ENST00000520168 VEGFDO43915 354 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 PRAMEF11O60813 436 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 DNAJC6O75061 913 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 PALMO75781 387 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 MTA2O94776 668 aa4.79□□□□□ -1.64
SDCBP-207ENST00000520168 LSM8O95777 96 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms