RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 EPSTI1Q96J88 318 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 C8orf76Q96K31 380 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 IP6K3Q96PC2 410 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 LMF1Q96S06 567 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 TRIM51Q9BSJ1 452 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 TUBB2BQ9BVA1 445 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 SIK2Q9H0K1 926 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 EPS8L2Q9H6S3 715 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 EPHA6Q9UF33 1036 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 CNOT8Q9UFF9 292 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ATP8A1Q9Y2Q0 1164 aa6.58□□□□□ -1.36
CTNNA1-216ENST00000519489 ABCA1O95477 2261 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 ARHGEF9O43307 516 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 SNX2O60749 519 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 ZRANB2O95218 330 aaKnown RBP eCLIP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 CRYABP02511 175 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 SETSIPP0DME0 302 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 ZNF30P17039 623 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 TFE3P19532 575 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 NFKB1P19838 968 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 ERCC5P28715 1186 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 CHRNB4P30926 498 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 HADHAP40939 763 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 CTSCP53634 463 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 AP3M2P53677 418 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC8A3P57103 927 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 RAC1P63000 192 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 GNA12Q03113 381 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 ACY1Q03154 408 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 PPP3CAQ08209 521 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 FAM174BQ3ZCQ3 159 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 MLIPQ5VWP3 458 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC9B2Q86UD5 537 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 CAMK1DQ8IU85 385 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 P3H2Q8IVL5 708 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 FAM20CQ8IXL6 584 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 FAM149B1Q96BN6 582 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 THOC3Q96J01 351 aaKnown RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 BACH2Q9BYV9 841 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 LHPPQ9H008 270 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 KLC2Q9H0B6 622 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 UCK1Q9HA47 277 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 SP110Q9HB58 689 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 PHPT1Q9NRX4 125 aaPredicted RBP6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 PPP4R2Q9NY27 417 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 COQ3Q9NZJ6 369 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 FRRS1LQ9P0K9 344 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 MFHAS1Q9Y4C4 1052 aa6.57□□□□□ -1.36
CTNNA1-216ENST00000519489 IGLV3-10A0A075B6K4 115 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 C17orf113A0A1B0GUU1 675 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CFAP69A5D8W1 941 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 MBD3L4A6NDZ8 208 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 MBD3L5A6NJ08 208 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 NPIPA5E9PKD4 350 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 FAM227AF5H4B4 570 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 PDE2AO00408 941 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 DNAJC6O75061 913 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 GADD45BO75293 160 aaPredicted RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 TMCC1O94876 653 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CNOT4O95628 575 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 FAM157CP0CG43 387 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 F3P13726 295 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 AMD1P17707 334 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 OR1E1P30953 314 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 ETV3P41162 512 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 GCLMP48507 274 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 RPL34P49207 117 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 IDH3AP50213 366 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 SUOXP51687 545 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 SNRPD1P62314 119 aaKnown RBP6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 ARG2P78540 354 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CACNG1Q06432 222 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 DMTNQ08495 405 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC9A5Q14940 896 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CYP2A13Q16696 494 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 AGAP9Q5VTM2 703 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 KIRREL2Q6UWL6 708 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 LCLAT1Q6UWP7 414 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 PRSS57Q6UWY2 283 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 NAPRTQ6XQN6 538 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CAPN12Q6ZSI9 719 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 BEND5Q7L4P6 421 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 C12orf56Q8IXR9 622 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 LZTR1Q8N653 840 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 OR2Y1Q8NGV0 311 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 ASB5Q8WWX0 329 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CPT1BQ92523 772 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 HAS2Q92819 552 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 CLIP3Q96DZ5 547 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 SEC16BQ96JE7 1060 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 EXOC2Q96KP1 924 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 AK8Q96MA6 479 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 AGAP2Q99490 1192 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 TTYH3Q9C0H2 523 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 SLC22A11Q9NSA0 550 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 DMAC2Q9NW81 257 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 DDIT4Q9NX09 232 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 LHX3Q9UBR4 397 aa6.56□□□□□ -1.36
CTNNA1-216ENST00000519489 NPIPA1Q9UND3 350 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms