RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 HEXBP07686 556 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CD3EP07766 207 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SUPT20HL2P0C7V6 817 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZBTB48P10074 688 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLUP10909 449 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC5A1P13866 664 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF26P17031 533 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HOXB8P17481 243 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC9A1P19634 815 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DDCP20711 480 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 WARSP23381 471 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HLA-DMAP28067 261 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HMGCLP35914 325 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HNF4AP41235 474 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CAPZA2P47755 286 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PCP4P48539 62 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PSMD8P48556 350 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 FNTBP49356 437 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 AFF3P51826 1226 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATP12AP54707 1039 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 UGT2B15P54855 530 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 EIF3EP60228 445 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPCS3P61009 180 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ATP2C1P98194 919 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CNTN2Q02246 1040 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ALDH6A1Q02252 535 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PRKCDQ05655 676 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 INCA1Q0VD86 236 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DBPQ10586 325 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CDH17Q12864 832 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PMS2P3Q13401 168 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PTK6Q13882 451 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZNF267Q14586 743 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PUM1Q14671 1186 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM132BQ14DG7 1078 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SEC23AQ15436 765 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 BAK1Q16611 211 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CA9Q16790 459 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KIZQ2M2Z5 673 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 COL28A1Q2UY09 1125 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM95Q3KNT9 176 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 MGAT5BQ3V5L5 792 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 GTDC1Q4AE62 458 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HSF5Q4G112 596 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PLEKHG4Q58EX7 1191 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DALRD3Q5D0E6 543 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PAGE2BQ5JRK9 111 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 STXBP5Q5T5C0 1151 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KRT39Q6A163 491 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PM20D1Q6GTS8 502 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLFN12LQ6IEE8 588 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CENPPQ6IPU0 288 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 C11orf63Q6NUN7 778 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 C11orf88Q6PI97 169 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 RHBDF2Q6PJF5 856 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 NSMFQ6X4W1 530 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TMEM26Q6ZUK4 368 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CCDC149Q6ZUS6 474 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCTD8Q6ZWB6 473 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 USP49Q70CQ1 688 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 MAMDC2Q7Z304 686 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 GPAT4Q86UL3 456 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DGKHQ86XP1 1220 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 LYSMD2Q8IV50 215 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PHC2Q8IXK0 858 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DEFB107AQ8IZN7 70 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 RNF113BQ8IZP6 322 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 MPP5Q8N3R9 675 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 GUF1Q8N442 669 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KLHL36Q8N4N3 616 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 EMC1Q8N766 993 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 AMER2Q8N7J2 671 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM47BQ8NA70 645 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 C11orf65Q8NCR3 313 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CLRN3Q8NCR9 226 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRPV3Q8NET8 790 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 OR6C4Q8NGE1 309 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC7A14Q8TBB6 771 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 IFI44Q8TCB0 444 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 DEDD2Q8WXF8 326 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 JDP2Q8WYK2 163 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TFAP2CQ92754 450 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 NELL1Q92832 810 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 PPP1R14AQ96A00 147 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CPNE4Q96A23 557 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TRMT2BQ96GJ1 504 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 FCRL2Q96LA5 508 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 FAM111AQ96PZ2 611 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SORT1Q99523 831 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 KCTD14Q9BQ13 255 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TBCDQ9BTW9 1192 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 SLC12A9Q9BXP2 914 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 ZYG11BQ9C0D3 744 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 UPF3AQ9H1J1 476 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 BOLA2Q9H3K6 86 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 TFB2MQ9H5Q4 396 aaKnown RBP4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 HPS4Q9NQG7 708 aa4.76□□□□□ -1.65
HMGB1P19-201ENST00000517578 CATSPERZQ9NTU4 200 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms