RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 ASB18Q6ZVZ8 466 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PLXDC1Q8IUK5 500 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 BBS5Q8N3I7 341 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ESX1Q8N693 406 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SLC35G2Q8TBE7 412 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NSMCE1Q8WV22 266 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 C19orf60Q96EN9 201 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TRIM11Q96F44 468 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TEKT5Q96M29 485 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CATSPER2Q96P56 530 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TIMM29Q9BSF4 260 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ACTL8Q9H568 366 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PKD2L2Q9NZM6 624 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IFNKQ9P0W0 207 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LUZP4Q9P127 313 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CTTNBP2NLQ9P2B4 639 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PCDHGA6Q9Y5G7 932 aa8.1□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SYCE3A1L190 88 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PIPSLA2A3N6 862 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LRRD1A4D1F6 860 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 OR5K4A6NMS3 321 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PDZK1P1A8MUH7 402 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 H3BMH7 237 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CCL22O00626 93 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KMOO15229 486 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CNOT3O75175 753 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SORBS2O94875 1100 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NDST3O95803 873 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 VIPP01282 170 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PYGLP06737 847 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TPBGLP0DKB5 382 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NFKB1P19838 968 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FECHP22830 423 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CDKN2BP42772 138 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CDKN1CP49918 316 aaPredicted RBP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KPNA2P52292 529 aaKnown RBP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PMS2P54278 862 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 WNT3AP56704 352 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 DYNLT1P63172 113 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 XIAPP98170 497 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 AP1B1Q10567 949 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 KLRB1Q12918 225 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SEMA5AQ13591 1074 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MESDQ14696 234 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NFKBIBQ15653 356 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF569Q5MCW4 686 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PLEKHS1Q5SXH7 462 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 GPRC6AQ5T6X5 926 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 IRGCQ6NXR0 463 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 DAAM2Q86T65 1068 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 NT5DC3Q86UY8 548 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LRRTM4Q86VH4 590 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 PHYKPLQ8IUZ5 450 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 FAM26EQ8N5C1 309 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SLC25A41Q8N5S1 370 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LMNTD1Q8N9Z9 388 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CCDC112Q8NEF3 446 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZNF501Q96CX3 271 aaPredicted RBP8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 TCTN2Q96GX1 697 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RMDN2Q96LZ7 410 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 VPS35Q96QK1 796 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 MESP1Q9BRJ9 268 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZPBPQ9BS86 351 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 ZSCAN5AQ9BUG6 496 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 RAB33BQ9H082 229 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 CHST8Q9H2A9 424 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 SPTLC3Q9NUV7 552 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 LNPEPQ9UIQ6 1025 aa8.09□□□□□ -1.11
SCARNA20.3-201ENST00000516913 HIVEP1P15822 2718 aa8.09□□□□□ -1.12
SCARNA20.3-201ENST00000516913 FER1L5A0AVI2 2057 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 OR2AG2A6NM03 316 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 BTN3A3O00478 584 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 TOX3O15405 576 aaPredicted RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 KRT86O43790 486 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 CEACAM4O75871 244 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 MTA2O94776 668 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 SERPINC1P01008 464 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 AGTP01019 485 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 AMD1P17707 334 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 MAN1A1P33908 653 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 ADRA1AP35348 466 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 RORAP35398 523 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 HMGCLP35914 325 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 PTGIRP43119 386 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 PPM1FP49593 454 aaPredicted RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 UBASH3AP57075 661 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 DMPKQ09013 629 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 MRPL49Q13405 166 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 IL11RAQ14626 422 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 ZIC1Q15915 447 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 SLC18A3Q16572 532 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 INSCQ1MX18 579 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 PAPD7Q5XG87 772 aaKnown RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 METRNLQ641Q3 311 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 ZNF385CQ66K41 422 aaPredicted RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 DENND5AQ6IQ26 1287 aa8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 TIGD7Q6NT04 549 aaPredicted RBP8.08□□□□□ -1.12
SCARNA20.3-201ENST00000516913 TMEM220Q6QAJ8 160 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms