RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 EIF2S3LQ2VIR3 472 aaKnown RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 BMP2KLQ5H9B9 411 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CXorf66Q5JRM2 361 aaPredicted RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 KCNT1Q5JUK3 1230 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 WDR73Q6P4I2 378 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ZNF449Q6P9G9 518 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 DPPA4Q7L190 304 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 IQCA1Q86XH1 822 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 TICAM1Q8IUC6 712 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ARHGAP12Q8IWW6 846 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 THNSL1Q8IYQ7 743 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 AVL9Q8NBF6 648 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 TMEM116Q8NCL8 245 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 MSANTD4Q8NCY6 345 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 OR2AK2Q8NG84 335 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 GSDMBQ8TAX9 411 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 PRPF31Q8WWY3 499 aaKnown RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 PSPC1Q8WXF1 523 aaKnown RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 PERPQ96FX8 193 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CDHR1Q96JP9 859 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 PPP1R13BQ96KQ4 1090 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CSF3RQ99062 836 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 NCAPGQ9BPX3 1015 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 MRPL1Q9BYD6 325 aaKnown RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 C2orf40Q9H1Z8 148 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 GRPEL1Q9HAV7 217 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 PCDHB16Q9NRJ7 776 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 TAB2Q9NYJ8 693 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 MALT1Q9UDY8 824 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 RASAL2Q9UJF2 1139 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 HAO1Q9UJM8 370 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 GTF3C4Q9UKN8 822 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 ACSL5Q9ULC5 683 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 TTC7AQ9ULT0 858 aaPredicted RBP3.16□□□□□ -1.9
HERC4-215ENST00000515753 CCL27Q9Y4X3 112 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CEPT1Q9Y6K0 416 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CAPN7Q9Y6W3 813 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 FRMPD1Q5SYB0 1578 aa3.16□□□□□ -1.9
HERC4-215ENST00000515753 CTTNBP2Q8WZ74 1663 aa3.15□□□□□ -1.9
HERC4-215ENST00000515753 FAM237BA0A1B0GVD1 139 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 A0A1W2PQF6 199 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 A0A1W2PS18 150 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 FRMD3A2A2Y4 597 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 A8MXE2 369 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CDRT15L2A8MXV6 281 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ADAM20O43506 726 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 HNRNPCL1O60812 293 aaKnown RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 TBX10O75333 385 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ENTPD3O75355 529 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SEC31AO94979 1220 aaKnown RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 PTMAP06454 111 aaKnown RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 G6PDP11413 515 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 HLA-DOBP13765 273 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ATP6V1B1P15313 513 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 AMD1P17707 334 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 HOXC13P31276 330 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 HSPA1LP34931 641 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 PIP4K2AP48426 406 aaPredicted RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 HSD17B4P51659 736 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ZNF41P51814 821 aaPredicted RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 CDH8P55286 799 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 PITX1P78337 314 aaPredicted RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 IRF3Q14653 427 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 COG2Q14746 738 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SYT16Q17RD7 645 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 DPCR1Q3MIW9 517 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ACCSLQ4AC99 568 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ODF2Q5BJF6 829 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 ERMARDQ5T6L9 678 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 KRT80Q6KB66 452 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 TTI2Q6NXR4 508 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 C9orf139Q6ZV77 190 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CHST9Q7L1S5 443 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CCDC186Q7Z3E2 898 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SATL1Q86VE3 508 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SFR1Q86XK3 245 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 DNAAF5Q86Y56 855 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 OR8H3Q8N146 312 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 NDUFAF2Q8N183 169 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SCML4Q8N228 414 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 POC5Q8NA72 575 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 POGLUT1Q8NBL1 392 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 POC1AQ8NBT0 407 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 THAP6Q8TBB0 222 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 GTF3C6Q969F1 213 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 TAAR8Q969N4 342 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CMTM3Q96MX0 182 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 HGH1Q9BTY7 390 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 APOL6Q9BWW8 343 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 C1QTNF5Q9BXJ0 243 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 DBNDD1Q9H9R9 158 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 SCPEP1Q9HB40 452 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 XAB2Q9HCS7 855 aaKnown RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 GPR108Q9NPR9 543 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 CPSF2Q9P2I0 782 aaKnown RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 MTRRQ9UBK8 725 aa3.15□□□□□ -1.91
HERC4-215ENST00000515753 UBA2Q9UBT2 640 aaPredicted RBP3.15□□□□□ -1.91
HERC4-215ENST00000515753 MTMR6Q9Y217 621 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms