RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 MAP4P27816 1152 aaKnown RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 PSMB4P28070 264 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 PDE1BQ01064 536 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 DARS2Q6PI48 645 aaKnown RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 RANBP10Q6VN20 620 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 RAD9BQ6WBX8 426 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 TXLNBQ8N3L3 684 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 LRRC57Q8N9N7 239 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 ALG3Q92685 438 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 ZDHHC12Q96GR4 267 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 SPATA13Q96N96 652 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 TGM7Q96PF1 710 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 EFHD1Q9BUP0 239 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 LACRTQ9GZZ8 138 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 RBSNQ9H1K0 784 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 TRIT1Q9H3H1 467 aaKnown RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A7Q9HAW7 530 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A10Q9HAW8 530 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 UGT1A8Q9HAW9 530 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 TMEM184BQ9Y519 407 aaPredicted RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 ARL5AQ9Y689 179 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 SLC30A1Q9Y6M5 507 aa17.16■□□□□ 0.34
DDX41-217ENST00000515562 HELZ2Q9BYK8 2649 aaKnown RBP17.16■□□□□ 0.34
DDX41-217ENST00000515562 GRID2IPA4D2P6 1211 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 KLHL33A6NCF5 533 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 OR2AG2A6NM03 316 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 POP7O75817 140 aaKnown RBP17.15■□□□□ 0.34
DDX41-217ENST00000515562 RASSF9O75901 435 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 STK17BO94768 372 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 MSH3P20585 1137 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 ADRA1AP35348 466 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 CTSCP53634 463 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 CLCA4Q14CN2 919 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 CYB5D1Q6P9G0 228 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 PRSS42Q7Z5A4 293 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 EXD3Q8N9H8 876 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 ACRBPQ8NEB7 543 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 OR4K2Q8NGD2 314 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 ZNF398Q8TD17 642 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 RSC1A1Q92681 617 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 C19orf43Q9BQ61 176 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 SLC12A9Q9BXP2 914 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 SPRY4Q9C004 299 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 RAB33BQ9H082 229 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 GPN2Q9H9Y4 310 aaPredicted RBP17.15■□□□□ 0.34
DDX41-217ENST00000515562 APMAPQ9HDC9 416 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 TRIM10Q9UDY6 481 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 FEZ2Q9UHY8 353 aaPredicted RBP17.15■□□□□ 0.34
DDX41-217ENST00000515562 WDR37Q9Y2I8 494 aa17.15■□□□□ 0.34
DDX41-217ENST00000515562 GOLGA6L9A6NEM1 432 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 ZNF891A8MT65 544 aaPredicted RBP17.14■□□□□ 0.33
DDX41-217ENST00000515562 SRP72O76094 671 aaKnown RBP17.14■□□□□ 0.33
DDX41-217ENST00000515562 CRTAMO95727 393 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
DDX41-217ENST00000515562 CYP4F2P78329 520 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 ABHD18Q0P651 414 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 MAP7Q14244 749 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 TBR1Q16650 682 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 FNBP1LQ5T0N5 605 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 KLHL35Q6PF15 583 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 TMEM220Q6QAJ8 160 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 SYCE1Q8N0S2 351 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 UBL4BQ8N7F7 174 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 TTC13Q8NBP0 860 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 CCDC110Q8TBZ0 833 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 BAG1Q99933 345 aaPredicted RBP17.14■□□□□ 0.33
DDX41-217ENST00000515562 APOL2Q9BQE5 337 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 EPHA6Q9UF33 1036 aa17.14■□□□□ 0.33
DDX41-217ENST00000515562 MIF4GDA9UHW6 222 aaKnown RBP17.13■□□□□ 0.33
DDX41-217ENST00000515562 J3QKU1 62 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 FAM87AP0C7U9 286 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 PYGMP11217 842 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 PBLDP30039 288 aaPredicted RBP17.13■□□□□ 0.33
DDX41-217ENST00000515562 LEPRP48357 1165 aaKnown RBP17.13■□□□□ 0.33
DDX41-217ENST00000515562 FOXM1Q08050 763 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 NFE2L1Q14494 772 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 IL11RAQ14626 422 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 PTPRCAPQ14761 206 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 BORAQ6PGQ7 559 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 FAM83HQ6ZRV2 1179 aaPredicted RBP17.13■□□□□ 0.33
DDX41-217ENST00000515562 PEX26Q7Z412 305 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 ESX1Q8N693 406 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 BEND7Q8N7W2 519 aaPredicted RBP17.13■□□□□ 0.33
DDX41-217ENST00000515562 ULK4Q96C45 1275 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 SLC45A3Q96JT2 553 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 CATSPER2Q96P56 530 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 FAM118BQ9BPY3 351 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 TBL1YQ9BQ87 522 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 ULBP3Q9BZM4 244 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 ASB8Q9H765 288 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 FKBPLQ9UIM3 349 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 AMFRQ9UKV5 643 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 PIEZO2Q9H5I5 2752 aa17.13■□□□□ 0.33
DDX41-217ENST00000515562 MGAT4DA6NG13 374 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 DLGAP3O95886 979 aa17.12■□□□□ 0.33
DDX41-217ENST00000515562 RALBP11234 206 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms